RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 GPX1P07203 203 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 CT45A6P0DMU7 189 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 CT45A5P0DMU8 189 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 CT45A7P0DMV0 189 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 SLC25A6P12236 298 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 ZNF43P17038 809 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 ADRA2CP18825 462 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 EDN2P20800 178 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 FCGR2CP31995 323 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 PPP1CCP36873 323 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 FABP6P51161 128 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 DAP3P51398 398 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 ZNF133P52736 654 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 DLX6P56179 175 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 NXPH1P58417 271 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 RPS14P62263 151 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 GGTLC2Q14390 218 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 ELOCQ15369 112 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 MRPL23Q16540 153 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 CT45A1Q5HYN5 189 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 NCBP2-AS2Q69YL0 99 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 SLC25A34Q6PIV7 304 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 ZNF474Q6S9Z5 364 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 CYP2G1PQ6ZSU1 146 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 C16orf82Q7Z2V1 217 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 MDGA2Q7Z553 956 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 OR5H2Q8NGV7 314 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 OR4A16Q8NH70 328 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 ATP6V0E2Q8NHE4 81 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 CT45A3Q8NHU0 189 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 FNDC9Q8TBE3 224 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 FAM213BQ8TBF2 198 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 GNPNAT1Q96EK6 184 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 COQ2Q96H96 371 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 GMPPAQ96IJ6 420 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 DUX3Q96PT4 197 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 DERL3Q96Q80 235 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 GPER1Q99527 375 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 C16orf70Q9BSU1 422 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 HCAR1Q9BXC0 346 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 GPR174Q9BXC1 333 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 IFI27L2Q9H2X8 130 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 PRO3102Q9H379 93 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 MAP1LC3AQ9H492 121 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 SPANXB1Q9NS25 103 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 CLCF1Q9UBD9 225 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 RARRES3Q9UL19 164 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 SH2B3Q9UQQ2 575 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 IER3IP1Q9Y5U9 82 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 PDCD11Q14690 1871 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 NUP210LQ5VU65 1888 aa5.04□□□□□ -1.6
ECHDC1-215ENST00000475319 TRAV1-1A0A0B4J248 108 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 A0A1W2PPV9 198 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 H0YJW9 148 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 J3QRE1 110 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 GPR137BO60478 399 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 CD3DP04234 171 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 CRISP2P16562 243 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 MDKP21741 143 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 APOBEC1P41238 236 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 NSG1P42857 185 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 RPL27P61353 136 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 EWSR1Q01844 656 aaKnown RBP eCLIP5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 PPP1R1AQ13522 171 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 PAFAH1B3Q15102 231 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 ZNF77Q15935 545 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 ACSF3Q4G176 576 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 ENTPD8Q5MY95 495 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 DMKNQ6E0U4 476 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 TMEM211Q6ICI0 200 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 DHRS13Q6UX07 377 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 BCDIN3DQ7Z5W3 292 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 SGPP2Q8IWX5 399 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 OR10G6Q8NH81 332 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 ZNRF2Q8NHG8 242 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 CLDND2Q8NHS1 167 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 FAM110DQ8TAY7 271 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 PLPPR1Q8TBJ4 325 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 TMEM54Q969K7 222 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 BORCS7Q96B45 105 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 FLYWCH2Q96CP2 140 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 SMIM19Q96E16 107 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 PGLYRP3Q96LB9 341 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 SCGB3A2Q96PL1 93 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 EBPLQ9BY08 206 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 COMMD5Q9GZQ3 224 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 OR2D2Q9H210 308 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 ARL15Q9NXU5 204 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 POLDIP2Q9Y2S7 368 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 LINC00312Q9Y6C7 94 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 V9GY05 133 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 V9GYY9 64 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 A0A0G2JMZ2 1700 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 LRRC37A2A6NM11 1700 aa5.03□□□□□ -1.6
ECHDC1-215ENST00000475319 TRBV9A0A0B4J1U6 114 aa5.02□□□□□ -1.61
ECHDC1-215ENST00000475319 A0A1W2PPM0 123 aa5.02□□□□□ -1.61
ECHDC1-215ENST00000475319 FAM90A8PA6NJQ4 464 aa5.02□□□□□ -1.61
ECHDC1-215ENST00000475319 FNDC10F2Z333 226 aa5.02□□□□□ -1.61
ECHDC1-215ENST00000475319 ISLRO14498 428 aa5.02□□□□□ -1.61
ECHDC1-215ENST00000475319 PRYO14603 147 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 789.8 ms