RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 TMEM244Q5VVB8 128 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 C3orf56Q8N813 242 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 H1FXQ92522 213 aaKnown RBP9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 LHX4Q969G2 390 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 SDSLQ96GA7 329 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 HARBI1Q96MB7 349 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 C1orf147Q96MC9 270 aaPredicted RBP9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 MBOAT4Q96T53 435 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 ABCG5Q9H222 651 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 SPANXA1Q9NS26 97 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 PLEKHJ1Q9NW61 149 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 ZNF222Q9UK12 451 aa9.46□□□□□ -0.89
HLA-DOB-208ENST00000475235 IGKV1D-17A0A075B6S4 117 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 J3QRE1 110 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 SLC1A7O00341 560 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 SSNA1O43805 119 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 HLA-DQB1P01920 261 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 MPZP25189 248 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 CFPP27918 469 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 HTR2CP28335 458 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 OR2B8PP59922 312 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 NCS1P62166 190 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 OPCMLQ14982 345 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 RUSC1-AS1Q66K80 236 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 ACP7Q6ZNF0 438 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 VMO1Q7Z5L0 202 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 ZNF546Q86UE3 836 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 Q8N402 240 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 FGFRL1Q8N441 504 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 TMEM86BQ8N661 226 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 TMEM185AQ8NFB2 350 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 PP6455Q8WZ26 134 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 FCGR1BQ92637 280 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 DUX5Q96PT3 197 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 NRIP2Q9BQI9 281 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 GPN1Q9HCN4 374 aaPredicted RBP9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 TMED3Q9Y3Q3 217 aa9.46□□□□□ -0.9
HLA-DOB-208ENST00000475235 TRAV8-7A0A075B6U6 113 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 LOC100130705A0A1B0GUX0 176 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 MDFIC2A0A1B0GVS7 189 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 LOC107986453A0A1B0GWG9 222 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 A6NIN4 97 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 M0R1W7 72 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 HOXA3O43365 443 aaPredicted RBP9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 SYNGR1O43759 233 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 ADAP1O75689 374 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 ISG15P05161 165 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 GABRB1P18505 474 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 FUT6P51993 359 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 GP2P55259 537 aaKnown RBP9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 ERVFRD-1P60508 538 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 JOSD1Q15040 202 aaPredicted RBP9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 AWAT1Q58HT5 328 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 Q6YL49 198 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 SERPINA12Q8IW75 414 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 H1FOOQ8IZA3 346 aaPredicted RBP9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 ZNRF1Q8ND25 227 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 BORCS8Q96FH0 119 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 SEC11CQ9BY50 192 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 HES4Q9HCC6 221 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 INPP5EQ9NRR6 644 aa9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 SOX21Q9Y651 276 aaPredicted RBP9.45□□□□□ -0.9
HLA-DOB-208ENST00000475235 FBN3Q75N90 2809 aa9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 TRAV26-1A0A087WT03 109 aa9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 OR5H14A6NHG9 310 aa9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 SNRPCP09234 159 aaKnown RBP9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 UCHL1P09936 223 aa9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 PRDX2P32119 198 aa9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 OR12D2P58182 307 aa9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 SRSF4Q08170 494 aaKnown RBP9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 RAB40BQ12829 278 aa9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 KIAA0141Q14154 515 aaPredicted RBP9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 UBE2V2Q15819 145 aa9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 SYS1Q8N2H4 156 aa9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 RNF152Q8N8N0 203 aa9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 OR1S1Q8NH92 325 aa9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 SSMEM1Q8WWF3 244 aa9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 ZNF488Q96MN9 340 aa9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 C20orf85Q9H1P6 137 aa9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 WFDC1Q9HC57 220 aa9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 RBFOX1Q9NWB1 397 aaKnown RBP9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 FRRS1LQ9P0K9 344 aa9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 OR14J1Q9UGF5 321 aa9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 RPL36Q9Y3U8 105 aaKnown RBP9.44□□□□□ -0.9
HLA-DOB-208ENST00000475235 ARHGAP32A7KAX9 2087 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 C7orf66A4D0T2 115 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 H3BSH0 61 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 J3QLW9 94 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 CFDP00746 253 aaPredicted RBP9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 KNG1P01042 644 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 GCGP01275 180 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 TFF1P04155 84 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 ZNF19P17023 458 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 ZNF20P17024 532 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 BRS3P32247 399 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 LGALS7P47929 136 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 ERVK11-1P61568 191 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 CST9LP1Q5W188 147 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 ACOT7LQ6ZUV0 252 aa9.43□□□□□ -0.9
HLA-DOB-208ENST00000475235 BOD1L2Q8IYS8 172 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms