RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 FHITP49789 147 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 HBG1P69891 147 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 HBG2P69892 147 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 DEFA5Q01523 94 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 TLE1Q04724 770 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 MEF2CQ06413 473 aaPredicted RBP8.1□□□□□ -1.11
USP39-214ENST00000474572 ATP6V1FQ16864 119 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 LRRC75BQ2VPJ9 315 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 OR2B11Q5JQS5 317 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 ADAM5Q6NVV9 412 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 CENPVQ7Z7K6 275 aaPredicted RBP8.1□□□□□ -1.11
USP39-214ENST00000474572 TGIF2LYQ8IUE0 185 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 C1orf87Q8N0U7 546 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 TMEM217Q8N7C4 229 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 FAM216BQ8N7L0 139 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 RNASE6Q93091 150 aaKnown RBP8.1□□□□□ -1.11
USP39-214ENST00000474572 R3HDM4Q96D70 268 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 CIB3Q96Q77 187 aaPredicted RBP8.1□□□□□ -1.11
USP39-214ENST00000474572 CCL13Q99616 98 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 ABHD14AQ9BUJ0 271 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 SMDT1Q9H4I9 107 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 DCAF16Q9NXF7 216 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 COQ3Q9NZJ6 369 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 TMA7Q9Y2S6 64 aaKnown RBP8.1□□□□□ -1.11
USP39-214ENST00000474572 RFNGQ9Y644 331 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 LINC00312Q9Y6C7 94 aa8.1□□□□□ -1.11
USP39-214ENST00000474572 MARCH11A6NNE9 402 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 VSTM5A8MXK1 200 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 ZG16O60844 167 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 FCN3O75636 299 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 IFNA5P01569 189 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 PRH1P02810 166 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 H2AFB1P0C5Y9 115 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 SFTA3P0C7M3 94 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 OR9G9P0C7N8 305 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 THBS3P49746 956 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 LINC00205P59089 165 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 RUNX1Q01196 453 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 ZNF616Q08AN1 781 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 PEA15Q15121 130 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 POU2AF1Q16633 256 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 GUK1Q16774 197 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 LTC4SQ16873 150 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 VWC2Q2TAL6 325 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 CT45A1Q5HYN5 189 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 DHRS7BQ6IAN0 325 aaPredicted RBP8.09□□□□□ -1.11
USP39-214ENST00000474572 C1orf229Q6ZS94 237 aaPredicted RBP8.09□□□□□ -1.11
USP39-214ENST00000474572 H2BFWTQ7Z2G1 175 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 OR52E5Q8NH55 327 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 CT45A3Q8NHU0 189 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 FAM213BQ8TBF2 198 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 ADTRPQ96IZ2 230 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 OR4C12Q96R67 309 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 WDR61Q9GZS3 305 aaKnown RBP8.09□□□□□ -1.11
USP39-214ENST00000474572 EGLN1Q9GZT9 426 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 SAP30LQ9HAJ7 183 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 KIAA1456Q9P272 454 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 KAAG1Q9UBP8 84 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 RPUSD1Q9UJJ7 312 aaKnown RBP8.09□□□□□ -1.11
USP39-214ENST00000474572 TIMM9Q9Y5J7 89 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 KPTNQ9Y664 436 aa8.09□□□□□ -1.11
USP39-214ENST00000474572 PPIAL4EA0A075B759 164 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 TRAV1-1A0A0B4J248 108 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 TRGV8A0A0C4DH27 118 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.08□□□□□ -1.12
USP39-214ENST00000474572 hADV38S2A0JD32 116 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 MEX3AA1L020 520 aaKnown RBP8.08□□□□□ -1.12
USP39-214ENST00000474572 PPIAL4DF5H284 164 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 M0R1X1 148 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 ATXN7O15265 892 aaPredicted RBP8.08□□□□□ -1.12
USP39-214ENST00000474572 FCGR3BO75015 233 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 SNAPINO95295 136 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 FSTL3O95633 263 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 ARG1P05089 322 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 PPIAL4FP0DN26 164 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 MDKP21741 143 aaPredicted RBP8.08□□□□□ -1.12
USP39-214ENST00000474572 CHRNB4P30926 498 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 CASP6P55212 293 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 CCL8P80075 99 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 SERF2P84101 59 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 TAGLNQ01995 201 aaKnown RBP8.08□□□□□ -1.12
USP39-214ENST00000474572 SLC38A11Q08AI6 406 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 RPL39P5Q59GN2 51 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 SPANXN5Q5MJ07 72 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 UTF1Q5T230 341 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 SLC25A48Q6ZT89 311 aaKnown RBP8.08□□□□□ -1.12
USP39-214ENST00000474572 ZNF429Q86V71 674 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 DTD1Q8TEA8 209 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 PLPPR2Q96GM1 343 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 PBDC1Q9BVG4 233 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 MS4A5Q9H3V2 200 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 TMEM106BQ9NUM4 274 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 PRELID3BQ9Y3B1 194 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 PPIAL4AQ9Y536 164 aa8.08□□□□□ -1.12
USP39-214ENST00000474572 CADP27708 2225 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 SAA2-SAA4A0A096LPE2 208 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 LOC105371267A0A1B0GV96 52 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 FAM74A7A6NL05 159 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 B9A039 149 aa8.07□□□□□ -1.12
USP39-214ENST00000474572 AGPAT2O15120 278 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms