RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 C1orf174Q8IYL3 243 aa15.68■□□□□ 0.1
ECHDC1-214ENST00000474289 C1QTNF5Q9BXJ0 243 aa15.68■□□□□ 0.1
ECHDC1-214ENST00000474289 RBM7Q9Y580 266 aaKnown RBP15.68■□□□□ 0.1
ECHDC1-214ENST00000474289 USF3Q68DE3 2245 aa15.68■□□□□ 0.1
ECHDC1-214ENST00000474289 TRAV39A0A0B4J263 110 aa15.68■□□□□ 0.1
ECHDC1-214ENST00000474289 DEGS1O15121 323 aa15.68■□□□□ 0.1
ECHDC1-214ENST00000474289 ZNHIT1O43257 154 aa15.68■□□□□ 0.1
ECHDC1-214ENST00000474289 SYNGR1O43759 233 aa15.68■□□□□ 0.1
ECHDC1-214ENST00000474289 ZIC3O60481 467 aa15.68■□□□□ 0.1
ECHDC1-214ENST00000474289 GCSAMLQ5JQS6 135 aa15.68■□□□□ 0.1
ECHDC1-214ENST00000474289 SIGLECL1Q8N7X8 197 aa15.68■□□□□ 0.1
ECHDC1-214ENST00000474289 OR10P1Q8NGE3 313 aa15.68■□□□□ 0.1
ECHDC1-214ENST00000474289 ORAOV1Q8WV07 137 aa15.68■□□□□ 0.1
ECHDC1-214ENST00000474289 ZNF488Q96MN9 340 aa15.68■□□□□ 0.1
ECHDC1-214ENST00000474289 TRAV38-1A0A0B4J264 116 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 NKX6-3A6NJ46 265 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 G3V3Y1 287 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 SERPINA7P05543 415 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 SUMO1P63165 101 aaKnown RBP15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 MKXQ8IYA7 352 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 OR5A2Q8NGI9 324 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 OR10G8Q8NGN5 311 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 LRFN3Q9BTN0 628 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 ZNF703Q9H7S9 590 aaPredicted RBP15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 UQCR10Q9UDW1 63 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 LAMTOR2Q9Y2Q5 125 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 C2CD4DB7Z1M9 353 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 ITGB1BP1O14713 200 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 SH2D1BO14796 132 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 SPINK2P20155 84 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 Q0VG73 95 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 CEACAM16Q2WEN9 425 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 TMPRSS7Q7RTY8 843 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 CPEB3Q8NE35 698 aaKnown RBP15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 UBALD1Q8TB05 177 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 ZNF586Q9NXT0 402 aa15.67■□□□□ 0.1
ECHDC1-214ENST00000474289 NPIPB11E5RHQ5 1161 aa15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 FCN1O00602 326 aa15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 HYPMO75409 117 aa15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 GPX1P07203 203 aa15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 FRMD6-AS1P0C7T7 363 aa15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 IGLC2P0DOY2 106 aa15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 IGLC3P0DOY3 106 aa15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 LTBRP36941 435 aa15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 KLF3P57682 345 aaPredicted RBP15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 NXPH1P58417 271 aa15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 KRTCAP3Q53RY4 240 aa15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 OCC1Q8TAD7 63 aa15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 TXN2Q99757 166 aa15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 AQP7O14520 342 aa15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 TRIP6Q15654 476 aaKnown RBP15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 CEACAM21Q3KPI0 293 aa15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 Q6ZN92 141 aa15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 SYT13Q7L8C5 426 aa15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 APOBEC3DQ96AK3 386 aaPredicted RBP15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 PRDM14Q9GZV8 571 aa15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 ZNF552Q9H707 407 aaPredicted RBP15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 TBL2Q9Y4P3 447 aaKnown RBP15.66■□□□□ 0.1
ECHDC1-214ENST00000474289 SLC17A3O00476 420 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 PCBD1P61457 104 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 Q6ZVH6 145 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 KMT5CQ86Y97 462 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 DRAM1Q8N682 238 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 Q8N7P7 452 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 OR1L6Q8NGR2 347 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 ZDHHC16Q969W1 377 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 STARD4Q96DR4 205 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 CCDC74BQ96LY2 380 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 TMEM204Q9BSN7 226 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 SF3B5Q9BWJ5 86 aaKnown RBP15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 ZG16O60844 167 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 LIFP15018 202 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 IER3P46695 156 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 HNRNPA3P51991 378 aaKnown RBP15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 VWC2Q2TAL6 325 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 HLA-DRB5Q30154 266 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 RABEPKQ7Z6M1 372 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 QTRT1Q9BXR0 403 aaKnown RBP15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 GNB4Q9HAV0 340 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 IL36BQ9NZH7 164 aa15.65■□□□□ 0.1
ECHDC1-214ENST00000474289 SCO2A0A1W2PP80 73 aa15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 C17orf112F2Z3M2 114 aa15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 RAMP3O60896 148 aa15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 CCL3P10147 92 aa15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 CEACAM8P31997 349 aaPredicted RBP15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 CDKN1BP46527 198 aa15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 DSCR4P56555 118 aaPredicted RBP15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 SLC25A45Q8N413 288 aa15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 TUBG2Q9NRH3 451 aa15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 DLL3Q9NYJ7 618 aa15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 GTF3C1Q12789 2109 aa15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 TRAV9-1A0A075B6T8 112 aa15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 SNURFLB1AK76 121 aa15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 GLB1P16278 677 aa15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 CCNOP22674 350 aa15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 G6PCP35575 357 aa15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 SLC23A3Q6PIS1 610 aa15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 COLCA1Q6ZS62 124 aa15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 AAED1Q7RTV5 226 aa15.64■□□□□ 0.09
ECHDC1-214ENST00000474289 CHODLQ9H9P2 273 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms