RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 VDAC2P45880 294 aaPredicted RBP7.24□□□□□ -1.25
SF3A1-206ENST00000471037 HERV-K104P61576 105 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 BLCAPP62952 87 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 SSX2Q16385 188 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 SCGB2B2Q4G0G5 96 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 PRAMEF5Q5TYX0 476 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 IDO2Q6ZQW0 420 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 Q6ZS46 218 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 C5orf24Q7Z6I8 188 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 NRARPQ7Z6K4 114 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 DUSP18Q8NEJ0 188 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 TERB2Q8NHR7 220 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 UBALD1Q8TB05 177 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 EDARADDQ8WWZ3 215 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 MOB3AQ96BX8 217 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 RCC1LQ96I51 464 aaKnown RBP7.24□□□□□ -1.25
SF3A1-206ENST00000471037 SCGB3A2Q96PL1 93 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 YPEL2Q96QA6 119 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 ZNF2Q9BSG1 426 aaPredicted RBP7.24□□□□□ -1.25
SF3A1-206ENST00000471037 RDH8Q9NYR8 311 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 OR1A1Q9P1Q5 309 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 OR2W1Q9Y3N9 320 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 SESN1Q9Y6P5 492 aa7.24□□□□□ -1.25
SF3A1-206ENST00000471037 A0A087X0M5 115 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 IGHV3-43A0A0B4J1X8 118 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 A0A1B0GX30 115 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 FAM172BPA6NC97 362 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 NDUFB6O95139 128 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 DUS4LO95620 317 aaKnown RBP7.23□□□□□ -1.25
SF3A1-206ENST00000471037 IGHV1-8P0DP01 117 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 IGHV3-43DP0DP04 118 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 PF4V1P10720 104 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 AADACP22760 399 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 NFYAP23511 347 aaPredicted RBP7.23□□□□□ -1.25
SF3A1-206ENST00000471037 NFYBP25208 207 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 CD34P28906 385 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 PPP1CCP36873 323 aaKnown RBP7.23□□□□□ -1.25
SF3A1-206ENST00000471037 CCR6P51684 374 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 UCP3P55916 312 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 GNMTQ14749 295 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 SURF2Q15527 256 aaPredicted RBP7.23□□□□□ -1.25
SF3A1-206ENST00000471037 LTC4SQ16873 150 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 TRIM16LQ309B1 348 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 TMEM95Q3KNT9 176 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 MORN2Q502X0 79 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 ARSJQ5FYB0 599 aaPredicted RBP7.23□□□□□ -1.25
SF3A1-206ENST00000471037 MINOS1Q5TGZ0 78 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 AADACL3Q5VUY0 350 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 C11orf87Q6NUJ2 197 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 PLET1Q6UQ28 207 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 OR5AU1Q8NGC0 362 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 OR52L2PQ8NGH6 319 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 OR13C8Q8NGS7 320 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 CHPT1Q8WUD6 406 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 NUBP2Q9Y5Y2 271 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 MINOS1-NBL1R4GNA1 71 aa7.23□□□□□ -1.25
SF3A1-206ENST00000471037 DNAH9Q9NYC9 4486 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 OR5H14A6NHG9 310 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 MMP23AO75900 390 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 SLC22A5O76082 557 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 PF4P02776 101 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 TCRBP04435 133 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 RAB7AP51149 207 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 LUMP51884 338 aaPredicted RBP7.22□□□□□ -1.25
SF3A1-206ENST00000471037 FXYD4P59646 89 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 EGFEM1PQ0D2K5 195 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 OXA1LQ15070 435 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 TCTEX1D4Q5JR98 221 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 LPCAT3Q6P1A2 487 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 C16orf82Q7Z2V1 217 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 SLC38A6Q8IZM9 456 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 C8orf31Q8N9H6 132 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 OR2AK2Q8NG84 335 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 OR10V1Q8NGI7 309 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 ZFAND1Q8TCF1 268 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 CREB3L1Q96BA8 519 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 ZNF486Q96H40 463 aaPredicted RBP7.22□□□□□ -1.25
SF3A1-206ENST00000471037 FXYD6Q9H0Q3 95 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 TMEM133Q9H2Q1 129 aa7.22□□□□□ -1.25
SF3A1-206ENST00000471037 RBM7Q9Y580 266 aaKnown RBP7.22□□□□□ -1.25
SF3A1-206ENST00000471037 TSSC4Q9Y5U2 329 aaPredicted RBP7.22□□□□□ -1.25
SF3A1-206ENST00000471037 IGHV2-26A0A0B4J1V2 119 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 IGKV1D-13A0A0B4J2D9 117 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 A0A1W2PRX2 142 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 H2AFB2P0C5Z0 115 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 OR8U9P0C7N5 309 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 IGKV1-13P0DP09 117 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 PGAM2P15259 253 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 KRTAP10-11P60412 298 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 MSMO1Q15800 293 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 SLC25A48Q6ZT89 311 aaKnown RBP7.21□□□□□ -1.26
SF3A1-206ENST00000471037 CENPSQ8N2Z9 138 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 LINC00311Q8N616 119 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 ZNF645Q8N7E2 425 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 ZNF439Q8NDP4 499 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 OR8U1Q8NH10 309 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 OR9G1Q8NH87 305 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 ZNF596Q8TC21 504 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 MARCH1Q8TCQ1 289 aa7.21□□□□□ -1.26
SF3A1-206ENST00000471037 SECTM1Q8WVN6 248 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms