RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 PPIAL4DF5H284 164 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 K7EQM0 130 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 PHF1O43189 567 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-207ENST00000468925 DHHO43323 396 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 VAMP5O95183 116 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 GJB5O95377 273 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 IGHG4P01861 327 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 SP9P0CG40 484 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 PPIAL4FP0DN26 164 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 PPIAL4GP0DN37 164 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 FABP2P12104 132 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 CCL2P13500 99 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 CPMP14384 443 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 CEBPBP17676 345 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 CCL1P22362 96 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 SSTR5P35346 364 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 METAP1P53582 386 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 RIPPLY3P57055 190 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 OR1D5P58170 312 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 RPL27P61353 136 aaKnown RBP4.12□□□□□ -1.75
SF3B1-207ENST00000468925 UBE2G1P62253 170 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 DPTQ07507 201 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 ZP4Q12836 540 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 GAGE5Q13069 117 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 GAGE6Q13070 117 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 KLF5Q13887 457 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-207ENST00000468925 NFATC4Q14934 902 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 LTC4SQ16873 150 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 RPEL1Q2QD12 228 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 CR1LQ2VPA4 569 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 CEACAM21Q3KPI0 293 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 TMEM97Q5BJF2 176 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 FHL5Q5TD97 284 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 PRAMEF5Q5TYX0 476 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 PRAMEF6Q5VXH4 476 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 ASPHD2Q6ICH7 369 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 TMEM211Q6ICI0 200 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 C22orf39Q6P5X5 142 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF793Q6ZN11 406 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 LINC00696Q6ZRV3 163 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 DOK3Q7L591 496 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 LYZL2Q7Z4W2 148 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 SELENOHQ8IZQ5 122 aaKnown RBP4.12□□□□□ -1.75
SF3B1-207ENST00000468925 LINC01555Q8NAE3 123 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 OR8B3Q8NGG8 313 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 OR5D13Q8NGL4 314 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 OR5AR1Q8NGP9 310 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 OR9G4Q8NGQ1 327 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 OR1N2Q8NGR9 330 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 OR4F5Q8NH21 305 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 OR2AE1Q8NHA4 323 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 PP6455Q8WZ26 134 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 DAZLQ92904 295 aaKnown RBP4.12□□□□□ -1.75
SF3B1-207ENST00000468925 LSM10Q969L4 123 aaKnown RBP4.12□□□□□ -1.75
SF3B1-207ENST00000468925 C5orf30Q96GV9 206 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 GRAMD2BQ96HH9 432 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 BMFQ96LC9 184 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 DGAT2Q96PD7 388 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 OR2A5Q96R48 311 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 OR8B2Q96RD0 313 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 ADOQ96SZ5 270 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 DERL1Q9BUN8 251 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 APOOQ9BUR5 198 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 PECRQ9BY49 303 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 ULBP3Q9BZM4 244 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 TXNIPQ9H3M7 391 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 GEMIN7Q9H840 131 aaKnown RBP4.12□□□□□ -1.75
SF3B1-207ENST00000468925 SAP30LQ9HAJ7 183 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 BEX4Q9NWD9 120 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-207ENST00000468925 JPT1Q9UK76 154 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 UBE2J1Q9Y385 318 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-207ENST00000468925 INSL5Q9Y5Q6 135 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 HEBP2Q9Y5Z4 205 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 HS3ST3A1Q9Y663 406 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 TRIP12Q14669 1992 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-207ENST00000468925 UNC80Q8N2C7 3258 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 TICRRQ7Z2Z1 1910 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 TRAV36DV7A0A075B6V5 113 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 TRAV26-1A0A087WT03 109 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 A0A1W2PS18 150 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 LINC01553A4QN01 128 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 MYADML2A6NDP7 307 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 FAM90A10PA6NDY2 464 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 WIPF3A6NGB9 483 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 FAM90A8PA6NJQ4 464 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 FAM90A7PA6NKC0 464 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF716A6NP11 495 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF850A8MQ14 1090 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 FAM90A22PA8MWA6 464 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 FAM90A12PA8MX19 464 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 FAM90A23PA8MXZ1 464 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 H7C1C5 153 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 M0R296 226 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 XRCC2O43543 280 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 SSSCA1O60232 199 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 GNG7O60262 68 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 MPDU1O75352 247 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 CA2P00918 260 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 CD55P08174 381 aa4.11□□□□□ -1.75
SF3B1-207ENST00000468925 FAM90A13PP0C7W8 464 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms