RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 C19orf54Q5BKX5 351 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 TMEM65Q6PI78 240 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 PDPNQ86YL7 162 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 LGALS14Q8TCE9 139 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 MRAPQ8TCY5 172 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 C4orf3Q8WVX3 66 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 TSNAXQ99598 290 aaKnown RBP13.34□□□□□ -0.27
SSBP1-207ENST00000468267 GINS4Q9BRT9 223 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 MCRIP2Q9BUT9 160 aaKnown RBP13.34□□□□□ -0.27
SSBP1-207ENST00000468267 OR2D2Q9H210 308 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 KLK15Q9H2R5 256 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 SDHAF2Q9NX18 166 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 FBXO7Q9Y3I1 522 aa13.34□□□□□ -0.27
SSBP1-207ENST00000468267 COL7A1Q02388 2944 aa13.33□□□□□ -0.27
SSBP1-207ENST00000468267 EGR2P11161 476 aaPredicted RBP13.33□□□□□ -0.28
SSBP1-207ENST00000468267 KRTAP10-11P60412 298 aa13.33□□□□□ -0.28
SSBP1-207ENST00000468267 RPS16P62249 146 aaKnown RBP13.33□□□□□ -0.28
SSBP1-207ENST00000468267 EGFEM1PQ0D2K5 195 aa13.33□□□□□ -0.28
SSBP1-207ENST00000468267 H1FOOQ8IZA3 346 aaPredicted RBP13.33□□□□□ -0.28
SSBP1-207ENST00000468267 ZNF491Q8N8L2 437 aa13.33□□□□□ -0.28
SSBP1-207ENST00000468267 UBE2E2Q96LR5 201 aa13.33□□□□□ -0.28
SSBP1-207ENST00000468267 ST6GALNAC5Q9BVH7 336 aa13.33□□□□□ -0.28
SSBP1-207ENST00000468267 DCSTAMPQ9H295 470 aa13.33□□□□□ -0.28
SSBP1-207ENST00000468267 METTL1Q9UBP6 276 aaKnown RBP13.33□□□□□ -0.28
SSBP1-207ENST00000468267 NUBP2Q9Y5Y2 271 aa13.33□□□□□ -0.28
SSBP1-207ENST00000468267 SPDEFO95238 335 aa13.32□□□□□ -0.28
SSBP1-207ENST00000468267 RAB9AP51151 201 aa13.32□□□□□ -0.28
SSBP1-207ENST00000468267 SCAND1P57086 179 aa13.32□□□□□ -0.28
SSBP1-207ENST00000468267 PITPNAQ00169 270 aa13.32□□□□□ -0.28
SSBP1-207ENST00000468267 ZNF260Q3ZCT1 412 aa13.32□□□□□ -0.28
SSBP1-207ENST00000468267 ZNF562Q6V9R5 426 aa13.32□□□□□ -0.28
SSBP1-207ENST00000468267 FLYWCH2Q96CP2 140 aaKnown RBP13.32□□□□□ -0.28
SSBP1-207ENST00000468267 C5orf30Q96GV9 206 aa13.32□□□□□ -0.28
SSBP1-207ENST00000468267 CLCC1Q96S66 551 aa13.32□□□□□ -0.28
SSBP1-207ENST00000468267 SLC35D1Q9NTN3 355 aa13.32□□□□□ -0.28
SSBP1-207ENST00000468267 RHBDL2Q9NX52 303 aa13.32□□□□□ -0.28
SSBP1-207ENST00000468267 ETV7Q9Y603 341 aa13.32□□□□□ -0.28
SSBP1-207ENST00000468267 TMEM235A6NFC5 223 aa13.31□□□□□ -0.28
SSBP1-207ENST00000468267 HOXD3P31249 432 aaPredicted RBP13.31□□□□□ -0.28
SSBP1-207ENST00000468267 RAB25P57735 213 aa13.31□□□□□ -0.28
SSBP1-207ENST00000468267 RUNX1Q01196 453 aa13.31□□□□□ -0.28
SSBP1-207ENST00000468267 TAGLNQ01995 201 aaKnown RBP13.31□□□□□ -0.28
SSBP1-207ENST00000468267 TMEM267Q0VDI3 215 aaPredicted RBP13.31□□□□□ -0.28
SSBP1-207ENST00000468267 ECSCRQ19T08 205 aa13.31□□□□□ -0.28
SSBP1-207ENST00000468267 IDNKQ5T6J7 187 aa13.31□□□□□ -0.28
SSBP1-207ENST00000468267 OR5H6Q8NGV6 325 aa13.31□□□□□ -0.28
SSBP1-207ENST00000468267 NUDCD2Q8WVJ2 157 aa13.31□□□□□ -0.28
SSBP1-207ENST00000468267 GNB4Q9HAV0 340 aa13.31□□□□□ -0.28
SSBP1-207ENST00000468267 FOXA2Q9Y261 457 aaPredicted RBP13.31□□□□□ -0.28
SSBP1-207ENST00000468267 VSIG4Q9Y279 399 aa13.31□□□□□ -0.28
SSBP1-207ENST00000468267 RBM7Q9Y580 266 aaKnown RBP13.31□□□□□ -0.28
SSBP1-207ENST00000468267 I3L521 148 aa13.3□□□□□ -0.28
SSBP1-207ENST00000468267 SLC25A17O43808 307 aa13.3□□□□□ -0.28
SSBP1-207ENST00000468267 SSX5O60225 188 aa13.3□□□□□ -0.28
SSBP1-207ENST00000468267 SOX15O60248 233 aa13.3□□□□□ -0.28
SSBP1-207ENST00000468267 CTXN2P0C2S0 81 aa13.3□□□□□ -0.28
SSBP1-207ENST00000468267 LGALS7P47929 136 aa13.3□□□□□ -0.28
SSBP1-207ENST00000468267 GNG2P59768 71 aa13.3□□□□□ -0.28
SSBP1-207ENST00000468267 FHL3Q13643 280 aa13.3□□□□□ -0.28
SSBP1-207ENST00000468267 AKIRIN2Q53H80 203 aa13.3□□□□□ -0.28
SSBP1-207ENST00000468267 PPP1R27Q86WC6 154 aa13.3□□□□□ -0.28
SSBP1-207ENST00000468267 TCTEX1D1Q8N7M0 179 aa13.3□□□□□ -0.28
SSBP1-207ENST00000468267 ABHD5Q8WTS1 349 aa13.3□□□□□ -0.28
SSBP1-207ENST00000468267 DPF1Q92782 380 aa13.3□□□□□ -0.28
SSBP1-207ENST00000468267 SLC25A38Q96DW6 304 aa13.3□□□□□ -0.28
SSBP1-207ENST00000468267 A3GALT2U3KPV4 340 aa13.3□□□□□ -0.28
SSBP1-207ENST00000468267 A0A087WXM4 84 aa13.29□□□□□ -0.28
SSBP1-207ENST00000468267 A0A1W2PN81 502 aa13.29□□□□□ -0.28
SSBP1-207ENST00000468267 CA2P00918 260 aa13.29□□□□□ -0.28
SSBP1-207ENST00000468267 IGLV2-23P01705 113 aa13.29□□□□□ -0.28
SSBP1-207ENST00000468267 CHRNA7P36544 502 aa13.29□□□□□ -0.28
SSBP1-207ENST00000468267 TIMM50Q3ZCQ8 353 aa13.29□□□□□ -0.28
SSBP1-207ENST00000468267 CNIH2Q6PI25 160 aa13.29□□□□□ -0.28
SSBP1-207ENST00000468267 BVESQ8NE79 360 aa13.29□□□□□ -0.28
SSBP1-207ENST00000468267 TSPAN14Q8NG11 270 aa13.29□□□□□ -0.28
SSBP1-207ENST00000468267 OR11H1Q8NG94 326 aa13.29□□□□□ -0.28
SSBP1-207ENST00000468267 OR5M8Q8NGP6 311 aa13.29□□□□□ -0.28
SSBP1-207ENST00000468267 ADTRPQ96IZ2 230 aa13.29□□□□□ -0.28
SSBP1-207ENST00000468267 TPSG1Q9NRR2 321 aa13.29□□□□□ -0.28
SSBP1-207ENST00000468267 SORL1Q92673 2214 aa13.28□□□□□ -0.28
SSBP1-207ENST00000468267 WI2-2373I1.2A0A1W2PRP0 233 aa13.28□□□□□ -0.28
SSBP1-207ENST00000468267 K7EIL1 84 aa13.28□□□□□ -0.28
SSBP1-207ENST00000468267 TMEM127O75204 238 aa13.28□□□□□ -0.28
SSBP1-207ENST00000468267 TNFAIP8O95379 198 aa13.28□□□□□ -0.28
SSBP1-207ENST00000468267 CRYGBP07316 175 aa13.28□□□□□ -0.28
SSBP1-207ENST00000468267 RRASP10301 218 aa13.28□□□□□ -0.28
SSBP1-207ENST00000468267 DUTP33316 252 aaKnown RBP13.28□□□□□ -0.28
SSBP1-207ENST00000468267 CBX3Q13185 183 aa13.28□□□□□ -0.28
SSBP1-207ENST00000468267 RTL8BQ17RB0 113 aa13.28□□□□□ -0.28
SSBP1-207ENST00000468267 TMEM177Q53S58 311 aa13.28□□□□□ -0.28
SSBP1-207ENST00000468267 ACTBL2Q562R1 376 aa13.28□□□□□ -0.28
SSBP1-207ENST00000468267 UNQ5815/PRO19632Q6UWF5 114 aa13.28□□□□□ -0.28
SSBP1-207ENST00000468267 LFNGQ8NES3 379 aa13.28□□□□□ -0.28
SSBP1-207ENST00000468267 OR1N2Q8NGR9 330 aa13.28□□□□□ -0.28
SSBP1-207ENST00000468267 DDB2Q92466 427 aa13.28□□□□□ -0.28
SSBP1-207ENST00000468267 YIPF6Q96EC8 236 aa13.28□□□□□ -0.28
SSBP1-207ENST00000468267 FAM103A1Q9BTL3 118 aaKnown RBP13.28□□□□□ -0.28
SSBP1-207ENST00000468267 VCX3AQ9NNX9 186 aa13.28□□□□□ -0.28
SSBP1-207ENST00000468267 OR2W1Q9Y3N9 320 aa13.28□□□□□ -0.28
SSBP1-207ENST00000468267 DNAH9Q9NYC9 4486 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms