RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 OR1B1Q8NGR6 318 aa11.72□□□□□ -0.53
BRAT1-203ENST00000467558 LY6G6EA0A0G2JKS1 128 aa11.72□□□□□ -0.53
BRAT1-203ENST00000467558 C12orf77C9JDV5 145 aa11.72□□□□□ -0.53
BRAT1-203ENST00000467558 BMI1P35226 326 aa11.72□□□□□ -0.53
BRAT1-203ENST00000467558 RPL27AP46776 148 aaKnown RBP11.72□□□□□ -0.53
BRAT1-203ENST00000467558 PSG5Q15238 335 aa11.72□□□□□ -0.53
BRAT1-203ENST00000467558 TP53RKQ96S44 253 aa11.72□□□□□ -0.53
BRAT1-203ENST00000467558 TUBD1Q9UJT1 453 aa11.72□□□□□ -0.53
BRAT1-203ENST00000467558 WASHC3Q9Y3C0 194 aa11.72□□□□□ -0.53
BRAT1-203ENST00000467558 U3KQA8 63 aa11.72□□□□□ -0.53
BRAT1-203ENST00000467558 BTCP35070 178 aa11.71□□□□□ -0.53
BRAT1-203ENST00000467558 ZP1P60852 638 aa11.71□□□□□ -0.53
BRAT1-203ENST00000467558 KHDC3LQ587J8 217 aa11.71□□□□□ -0.53
BRAT1-203ENST00000467558 AWAT1Q58HT5 328 aa11.71□□□□□ -0.53
BRAT1-203ENST00000467558 STXBP6Q8NFX7 210 aa11.71□□□□□ -0.53
BRAT1-203ENST00000467558 FGFBP3Q8TAT2 258 aa11.71□□□□□ -0.53
BRAT1-203ENST00000467558 BLNKQ8WV28 456 aa11.71□□□□□ -0.53
BRAT1-203ENST00000467558 RPL8P62917 257 aaKnown RBP11.71□□□□□ -0.53
BRAT1-203ENST00000467558 TNFRSF9Q07011 255 aa11.71□□□□□ -0.53
BRAT1-203ENST00000467558 OR5I1Q13606 314 aa11.71□□□□□ -0.53
BRAT1-203ENST00000467558 FAM162BQ5T6X4 162 aa11.71□□□□□ -0.53
BRAT1-203ENST00000467558 DHRS7BQ6IAN0 325 aaPredicted RBP11.71□□□□□ -0.53
BRAT1-203ENST00000467558 DHRS11Q6UWP2 260 aa11.71□□□□□ -0.53
BRAT1-203ENST00000467558 PDPNQ86YL7 162 aa11.71□□□□□ -0.53
BRAT1-203ENST00000467558 RBKSQ9H477 322 aa11.71□□□□□ -0.53
BRAT1-203ENST00000467558 DBX1A6NMT0 343 aa11.71□□□□□ -0.54
BRAT1-203ENST00000467558 AARDQ4LEZ3 155 aa11.71□□□□□ -0.54
BRAT1-203ENST00000467558 MDS2Q8NDY4 140 aa11.71□□□□□ -0.54
BRAT1-203ENST00000467558 OR9G1Q8NH87 305 aa11.71□□□□□ -0.54
BRAT1-203ENST00000467558 LINC01560Q8TB33 94 aa11.71□□□□□ -0.54
BRAT1-203ENST00000467558 COA4Q9NYJ1 87 aa11.71□□□□□ -0.54
BRAT1-203ENST00000467558 MIOXQ9UGB7 285 aa11.71□□□□□ -0.54
BRAT1-203ENST00000467558 AKAP6Q13023 2319 aa11.71□□□□□ -0.54
BRAT1-203ENST00000467558 GALR1P47211 349 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 FHL1Q13642 323 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 CLEC2AQ6UVW9 174 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 MMD2Q8IY49 270 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 TOX4O94842 621 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 PGA5P0DJD9 388 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 HSPE1P61604 102 aaKnown RBP11.7□□□□□ -0.54
BRAT1-203ENST00000467558 OR4X1Q8NH49 305 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 RSRP1Q9BUV0 290 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 RSPO3Q9BXY4 272 aaPredicted RBP11.7□□□□□ -0.54
BRAT1-203ENST00000467558 LPAR2Q9HBW0 351 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 NIT2Q9NQR4 276 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 TMEM140Q9NV12 185 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 GBF1Q92538 1859 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 B4DEV8 164 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 FAM90A1Q86YD7 464 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 GTF3AQ92664 365 aaKnown RBP11.7□□□□□ -0.54
BRAT1-203ENST00000467558 FANCMQ8IYD8 2048 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 PAGE4O60829 102 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 S1PR2O95136 353 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 CXorf1O96002 111 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 FOXG1P55316 489 aaPredicted RBP11.7□□□□□ -0.54
BRAT1-203ENST00000467558 RND3P61587 244 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 FAM74A3Q4VXF1 159 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 FAM210BQ96KR6 192 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 NRIP2Q9BQI9 281 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 RSG1Q9BU20 258 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 ASCL3Q9NQ33 180 aa11.7□□□□□ -0.54
BRAT1-203ENST00000467558 NUP210Q8TEM1 1887 aaPredicted RBP11.69□□□□□ -0.54
BRAT1-203ENST00000467558 PPIAL4CA0A0B4J2A2 164 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 C7orf77A4D0Y5 90 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 PPIAL4GP0DN37 164 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 UCP1P25874 307 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 SPACA3Q8IXA5 215 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 Q8WTZ3 238 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 TMEM18Q96B42 140 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 TMEM186Q96B77 213 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 GRAMD2BQ96HH9 432 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 RTBDNQ9BSG5 229 aaPredicted RBP11.69□□□□□ -0.54
BRAT1-203ENST00000467558 WDR61Q9GZS3 305 aaKnown RBP11.69□□□□□ -0.54
BRAT1-203ENST00000467558 ZNF407Q9C0G0 2248 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 ATXN7O15265 892 aaPredicted RBP11.69□□□□□ -0.54
BRAT1-203ENST00000467558 B3GALT5-AS1P59052 145 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 BSPH1Q075Z2 132 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 TAF15Q92804 592 aaKnown RBP eCLIP11.69□□□□□ -0.54
BRAT1-203ENST00000467558 TMEM106BQ9NUM4 274 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 BDP1A6H8Y1 2624 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 IGHV3-72A0A0B4J1Y9 119 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 PDE6DO43924 150 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 ARG1P05089 322 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 HIST3H3Q16695 136 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 TUSC1Q2TAM9 212 aa11.69□□□□□ -0.54
BRAT1-203ENST00000467558 DIDO1Q9BTC0 2240 aaKnown RBP11.68□□□□□ -0.54
BRAT1-203ENST00000467558 ETV2O00321 342 aaPredicted RBP11.68□□□□□ -0.54
BRAT1-203ENST00000467558 MMP7P09237 267 aaPredicted RBP11.68□□□□□ -0.54
BRAT1-203ENST00000467558 BATFQ16520 125 aa11.68□□□□□ -0.54
BRAT1-203ENST00000467558 PEAR1Q5VY43 1037 aaPredicted RBP11.68□□□□□ -0.54
BRAT1-203ENST00000467558 C10orf113Q5VZT2 155 aa11.68□□□□□ -0.54
BRAT1-203ENST00000467558 ABHD12Q8N2K0 398 aa11.68□□□□□ -0.54
BRAT1-203ENST00000467558 MRPL30Q8TCC3 161 aaKnown RBP11.68□□□□□ -0.54
BRAT1-203ENST00000467558 LEAP2Q969E1 77 aa11.68□□□□□ -0.54
BRAT1-203ENST00000467558 PERPQ96FX8 193 aa11.68□□□□□ -0.54
BRAT1-203ENST00000467558 RALYQ9UKM9 306 aaKnown RBP11.68□□□□□ -0.54
BRAT1-203ENST00000467558 H0YL77 283 aa11.68□□□□□ -0.54
BRAT1-203ENST00000467558 OR4C12Q96R67 309 aa11.68□□□□□ -0.54
BRAT1-203ENST00000467558 IL36RNQ9UBH0 155 aa11.68□□□□□ -0.54
BRAT1-203ENST00000467558 C1QL1O75973 258 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms