RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 CFDP00746 253 aaPredicted RBP7.5□□□□□ -1.21
HPS4-209ENST00000466781 NPPCP23582 126 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 CDX1P47902 265 aaPredicted RBP7.5□□□□□ -1.21
HPS4-209ENST00000466781 CACNG7P62955 275 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 OR13C6PQ8NH95 151 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 RBKSQ9H477 322 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 DTX4Q9Y2E6 619 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 B9A039 149 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 NPIPB11E5RHQ5 1161 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 FOXS1O43638 330 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 HOXB1P14653 301 aaPredicted RBP7.5□□□□□ -1.21
HPS4-209ENST00000466781 IL11P20809 199 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 LSM10Q969L4 123 aaKnown RBP7.5□□□□□ -1.21
HPS4-209ENST00000466781 RALYQ9UKM9 306 aaKnown RBP7.5□□□□□ -1.21
HPS4-209ENST00000466781 PATJQ8NI35 1801 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 TRAV20A0A0B4J274 112 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 SLC25A17O43808 307 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 PLAUP00749 431 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 SNRPCP09234 159 aaKnown RBP7.5□□□□□ -1.21
HPS4-209ENST00000466781 GCSAMLQ5JQS6 135 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 ZAR1Q86SH2 424 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 OR4X2Q8NGF9 303 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 M0QZK8 103 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 GGCTO75223 188 aaKnown RBP7.5□□□□□ -1.21
HPS4-209ENST00000466781 TRGC1P0CF51 173 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 SSTR5P35346 364 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 IBA57Q5T440 356 aaKnown RBP7.5□□□□□ -1.21
HPS4-209ENST00000466781 OR4D11Q8NGI4 311 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 IFT22Q9H7X7 185 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 AURKAIP1Q9NWT8 199 aaPredicted RBP7.5□□□□□ -1.21
HPS4-209ENST00000466781 THSD7BQ9C0I4 1608 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 LOC107984156A0A0G2JMH3 177 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 PGPA6NDG6 321 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 ZNF815PA8K554 130 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 H3BQ15 152 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 IGKV3-20P01619 116 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 RPLP1P05386 114 aaKnown RBP7.5□□□□□ -1.21
HPS4-209ENST00000466781 FAM159AQ6UWV7 190 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 ARL17AQ8IVW1 177 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 PNKDQ8N490 385 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 PGLYRP4Q96LB8 373 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 DPH3P1Q9H4G8 78 aa7.5□□□□□ -1.21
HPS4-209ENST00000466781 PCOLCEQ15113 449 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 NCMAPQ5T1S8 102 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 ZNF826PQ6ZT77 177 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 LINC01560Q8TB33 94 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 VN1R17PQ8TDU5 208 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 MS4A3Q96HJ5 214 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 ABHD1Q96SE0 405 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 KLK13Q9UKR3 277 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 SYNGR3O43761 229 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 CSRP1P21291 193 aaKnown RBP7.49□□□□□ -1.21
HPS4-209ENST00000466781 RND2P52198 227 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 MFAP2P55001 183 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 JOSD1Q15040 202 aaPredicted RBP7.49□□□□□ -1.21
HPS4-209ENST00000466781 XAF1Q6GPH4 301 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 KIAA0100Q14667 2235 aaKnown RBP7.49□□□□□ -1.21
HPS4-209ENST00000466781 OR4C45A6NMZ5 311 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 REG1AP05451 166 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 TGIF1Q15583 401 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 OR9G1Q8NH87 305 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 A0A1W2PQM1 296 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 DIRC3C9JPN6 131 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 TRGV3P03979 118 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 HIST1H1AQ02539 215 aaPredicted RBP7.49□□□□□ -1.21
HPS4-209ENST00000466781 FXYD3Q14802 87 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 ITLN2Q8WWU7 325 aaPredicted RBP7.49□□□□□ -1.21
HPS4-209ENST00000466781 COL25A1Q9BXS0 654 aaPredicted RBP7.49□□□□□ -1.21
HPS4-209ENST00000466781 GDF9O60383 454 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 LMX1BO60663 402 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 C1QAP02745 245 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 NGFRP08138 427 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 SUMO2P61956 95 aaKnown RBP7.49□□□□□ -1.21
HPS4-209ENST00000466781 TMEM30BQ3MIR4 351 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 TMEM186Q96B77 213 aa7.49□□□□□ -1.21
HPS4-209ENST00000466781 CTSBP07858 339 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 ZNF25P17030 456 aaPredicted RBP7.48□□□□□ -1.21
HPS4-209ENST00000466781 ATP6V0CP27449 155 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 DNM1P46Q6ZS02 220 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 LINC00469Q8N7U9 141 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 RGP1Q92546 391 aaPredicted RBP7.48□□□□□ -1.21
HPS4-209ENST00000466781 HIST1H4GQ99525 98 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 MARVELD1Q9BSK0 173 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 QTRT1Q9BXR0 403 aaKnown RBP7.48□□□□□ -1.21
HPS4-209ENST00000466781 MRPL13Q9BYD1 178 aaKnown RBP7.48□□□□□ -1.21
HPS4-209ENST00000466781 HSF4Q9ULV5 492 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 AMY1AP04745 511 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 APOBEC3AP31941 199 aaPredicted RBP7.48□□□□□ -1.21
HPS4-209ENST00000466781 IGSF11Q5DX21 431 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 ZNF418Q8TF45 676 aaPredicted RBP7.48□□□□□ -1.21
HPS4-209ENST00000466781 ISOC2Q96AB3 205 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 SSBP3Q9BWW4 388 aaPredicted RBP7.48□□□□□ -1.21
HPS4-209ENST00000466781 GPR61Q9BZJ8 451 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 TRAV8-7A0A075B6U6 113 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 A0A1W2PRX2 142 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 HTN3P15516 51 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 CD69Q07108 199 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 FOXB2Q5VYV0 432 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 ERASQ7Z444 233 aa7.48□□□□□ -1.21
HPS4-209ENST00000466781 H1FOOQ8IZA3 346 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms