RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PRR13Q9NZ81 148 aa11.35□□□□□ -0.59
HDAC6-215ENST00000465457 UBQLN2Q9UHD9 624 aa11.35□□□□□ -0.59
HDAC6-215ENST00000465457 PPIAL4EA0A075B759 164 aa11.34□□□□□ -0.59
HDAC6-215ENST00000465457 TRAV39A0A0B4J263 110 aa11.34□□□□□ -0.59
HDAC6-215ENST00000465457 PPIAL4DF5H284 164 aa11.34□□□□□ -0.59
HDAC6-215ENST00000465457 C15orf65H3BRN8 121 aa11.34□□□□□ -0.59
HDAC6-215ENST00000465457 TMEM178BH3BS89 294 aa11.34□□□□□ -0.59
HDAC6-215ENST00000465457 F2RL2O00254 374 aa11.34□□□□□ -0.59
HDAC6-215ENST00000465457 BCL2L11O43521 198 aa11.34□□□□□ -0.59
HDAC6-215ENST00000465457 ATG12O94817 140 aa11.34□□□□□ -0.59
HDAC6-215ENST00000465457 CYB5R3P00387 301 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-215ENST00000465457 PPIAL4FP0DN26 164 aa11.34□□□□□ -0.59
HDAC6-215ENST00000465457 SLC25A6P12236 298 aa11.34□□□□□ -0.59
HDAC6-215ENST00000465457 SP6Q3SY56 376 aa11.34□□□□□ -0.59
HDAC6-215ENST00000465457 SPRNQ5BIV9 151 aa11.34□□□□□ -0.59
HDAC6-215ENST00000465457 THOC7Q6I9Y2 204 aaKnown RBP11.34□□□□□ -0.59
HDAC6-215ENST00000465457 SLC35G3Q8N808 338 aa11.34□□□□□ -0.59
HDAC6-215ENST00000465457 ZNF680Q8NEM1 530 aa11.34□□□□□ -0.59
HDAC6-215ENST00000465457 GAFA1Q96PS6 74 aa11.34□□□□□ -0.59
HDAC6-215ENST00000465457 OR2S2Q9NQN1 319 aa11.34□□□□□ -0.59
HDAC6-215ENST00000465457 GSKIPQ9P0R6 139 aa11.34□□□□□ -0.59
HDAC6-215ENST00000465457 TRAV20A0A0B4J274 112 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 DNAJC9-AS1A6NH13 148 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 ZNF729A6NN14 1252 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-215ENST00000465457 ATP6V1G1O75348 118 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 FSHBP01225 129 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 OR8U9P0C7N5 309 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 EDDM3BP56851 147 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 S100A10P60903 97 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 RAB14P61106 215 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 MEF2CQ06413 473 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-215ENST00000465457 ZNF66Q6ZN08 573 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 LYZL2Q7Z4W2 148 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 C1QL4Q86Z23 238 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 SIGLECL1Q8N7X8 197 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 ZNRF1Q8ND25 227 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 OR10A7Q8NGE5 316 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 OR8U1Q8NH10 309 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 CORO2AQ92828 525 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 AQP10Q96PS8 301 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 PLEKHA2Q9HB19 425 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 CALYQ9NYX4 217 aa11.33□□□□□ -0.6
HDAC6-215ENST00000465457 IGHV1-69-2A0A0G2JMI3 117 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 hADV38S2A0JD32 116 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 MPTX1A8MV57 137 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 ST8SIA3O43173 380 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 YPEL1O60688 119 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 DEDDO75618 318 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 SSTR5P35346 364 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 RAB7AP51149 207 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 AP2S1P53680 142 aaPredicted RBP11.32□□□□□ -0.6
HDAC6-215ENST00000465457 EIF5AP63241 154 aaKnown RBP11.32□□□□□ -0.6
HDAC6-215ENST00000465457 RAB32Q13637 225 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 HFEQ30201 348 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 AVPI1Q5T686 147 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 SELENOHQ8IZQ5 122 aaKnown RBP11.32□□□□□ -0.6
HDAC6-215ENST00000465457 DRAM1Q8N682 238 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 PHYHIPLQ96FC7 376 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 YPEL2Q96QA6 119 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 HSD17B10Q99714 261 aaKnown RBP11.32□□□□□ -0.6
HDAC6-215ENST00000465457 ARPC5LQ9BPX5 153 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 GAL3ST2Q9H3Q3 398 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 LINC00574Q9H8X3 128 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 TAS2R3Q9NYW6 316 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 GNG12Q9UBI6 72 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 KAAG1Q9UBP8 84 aa11.32□□□□□ -0.6
HDAC6-215ENST00000465457 KBTBD11-OT1A0A1B0GTJ5 212 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 A0A1B0GU03 582 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 RNF222A6NCQ9 220 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 E5RGE8 158 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 TAAR5O14804 337 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 PPIHO43447 177 aaKnown RBP11.31□□□□□ -0.6
HDAC6-215ENST00000465457 IGLV2-14P01704 120 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 GYPAP02724 150 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 CGB3P0DN86 165 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 CGB7P0DN87 165 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 PVALBP20472 110 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-215ENST00000465457 MDKP21741 143 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-215ENST00000465457 MRPS11P82912 194 aaKnown RBP11.31□□□□□ -0.6
HDAC6-215ENST00000465457 NMSQ5H8A3 153 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 C5orf24Q7Z6I8 188 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 FAM219AQ8IW50 185 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 OR52L2PQ8NGH6 319 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 OR52M1Q8NGK5 317 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 LHFPL5Q8TAF8 219 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 CD300LFQ8TDQ1 290 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 LSM10Q969L4 123 aaKnown RBP11.31□□□□□ -0.6
HDAC6-215ENST00000465457 RAB39BQ96DA2 213 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 CCL13Q99616 98 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 RNF126Q9BV68 326 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 OR2D2Q9H210 308 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 CLN8Q9UBY8 286 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 NSG2Q9Y328 171 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 LINC00312Q9Y6C7 94 aa11.31□□□□□ -0.6
HDAC6-215ENST00000465457 TFF1P04155 84 aa11.3□□□□□ -0.6
HDAC6-215ENST00000465457 MMP9P14780 707 aa11.3□□□□□ -0.6
HDAC6-215ENST00000465457 PRTN3P24158 256 aa11.3□□□□□ -0.6
HDAC6-215ENST00000465457 PPP1CCP36873 323 aaKnown RBP11.3□□□□□ -0.6
HDAC6-215ENST00000465457 HTR2BP41595 481 aa11.3□□□□□ -0.6
HDAC6-215ENST00000465457 HOXA4Q00056 320 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms