RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 ETV6P41212 452 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 RFX2P48378 723 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 VEGFCP49767 419 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 PPOXP50336 477 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 ART1P52961 327 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 RAG2P55895 527 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 TMEM50BP56557 158 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 RBM11P57052 281 aaKnown RBP3.78□□□□□ -1.8
CSMD3-205ENST00000462254 FGF12P61328 243 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 RPS27AP62979 156 aaKnown RBP3.78□□□□□ -1.8
CSMD3-205ENST00000462254 TNFAIP6P98066 277 aaPredicted RBP3.78□□□□□ -1.8
CSMD3-205ENST00000462254 TLE4Q04727 773 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 RSU1Q15404 277 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 MRPL23Q16540 153 aaKnown RBP3.78□□□□□ -1.8
CSMD3-205ENST00000462254 MOGQ16653 247 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 PIGYQ3MUY2 71 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 FAM106AQ4KMX7 169 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 GPR157Q5UAW9 335 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 LINC00299Q6ZSB3 139 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 Q71RC1 249 aaPredicted RBP3.78□□□□□ -1.8
CSMD3-205ENST00000462254 OR2W3Q7Z3T1 314 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 MKXQ8IYA7 352 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 SAXO1Q8IYX7 474 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 OSR2Q8N2R0 312 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 ZSCAN4Q8NAM6 433 aaPredicted RBP3.78□□□□□ -1.8
CSMD3-205ENST00000462254 PTX4Q96A99 478 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 SEH1LQ96EE3 360 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 CPNE2Q96FN4 548 aaPredicted RBP3.78□□□□□ -1.8
CSMD3-205ENST00000462254 DIRAS2Q96HU8 199 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 CEP19Q96LK0 163 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 S100A13Q99584 98 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 SDHCQ99643 169 aaPredicted RBP3.78□□□□□ -1.8
CSMD3-205ENST00000462254 SOSTQ9BQB4 213 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 TM2D1Q9BX74 207 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 TMEM59Q9BXS4 323 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 CSTL1Q9H114 145 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 METTL9Q9H1A3 318 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 WDR13Q9H1Z4 485 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 PLEKHF2Q9H8W4 249 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 ELL3Q9HB65 397 aaPredicted RBP3.78□□□□□ -1.8
CSMD3-205ENST00000462254 HES4Q9HCC6 221 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 DYNLRB1Q9NP97 96 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 NRN1Q9NPD7 142 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 RBFOX1Q9NWB1 397 aaKnown RBP3.78□□□□□ -1.8
CSMD3-205ENST00000462254 SIGLEC8Q9NYZ4 499 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 CACNG2Q9Y698 323 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 FBN2P35556 2912 aa3.78□□□□□ -1.8
CSMD3-205ENST00000462254 SPTAN1Q13813 2472 aaKnown RBP3.77□□□□□ -1.81
CSMD3-205ENST00000462254 A0A0G2JMP0 313 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 A0A0X1KG70 313 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 KBTBD11-OT1A0A1B0GTJ5 212 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 CLDN25C9JDP6 229 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 INAFM1C9JVW0 142 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 LYNX1G3V0Z9 82 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 G3V4G9 280 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 GEMIN2O14893 280 aaKnown RBP3.77□□□□□ -1.81
CSMD3-205ENST00000462254 LY6HO94772 140 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 CYB5AP00167 134 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 CYB5R3P00387 301 aaPredicted RBP3.77□□□□□ -1.81
CSMD3-205ENST00000462254 CA1P00915 261 aaPredicted RBP3.77□□□□□ -1.81
CSMD3-205ENST00000462254 LHBP01229 141 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 HLA-DQB1P01920 261 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 TFF1P04155 84 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 ACAA1P09110 424 aaPredicted RBP3.77□□□□□ -1.81
CSMD3-205ENST00000462254 LYNX1P0DP58 116 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 GTF2F2P13984 249 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 COX6B1P14854 86 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 GABRR1P24046 479 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 CD40LGP29965 261 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 CFHR2P36980 270 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 KCNJ3P48549 501 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 SRP9P49458 86 aaKnown RBP3.77□□□□□ -1.81
CSMD3-205ENST00000462254 TAS2R20P59543 309 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 SNRPD2P62316 118 aaKnown RBP3.77□□□□□ -1.81
CSMD3-205ENST00000462254 GAGE5Q13069 117 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 GAGE6Q13070 117 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 TAF9Q16594 264 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 ODF3L2Q3SX64 289 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 ZNF260Q3ZCT1 412 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 NHLRC3Q5JS37 347 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 FAM201AQ5SY85 155 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 OLFML2AQ68BL7 652 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 ELP2Q6IA86 826 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 FAM131AQ6UXB0 335 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 ACP7Q6ZNF0 438 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 SNX29P2Q8IUI4 249 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 NRACQ8N912 160 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 ZNF114Q8NC26 417 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 C19orf18Q8NEA5 215 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 OR4M2Q8NGB6 313 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 OR51T1Q8NGJ9 327 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 OR10Z1Q8NGY1 313 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 LRRC29Q8WV35 223 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 S100ZQ8WXG8 99 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 YIPF5Q969M3 257 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 TIMD4Q96H15 378 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 NRIP2Q9BQI9 281 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 NIPSNAP3BQ9BS92 247 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 PECRQ9BY49 303 aa3.77□□□□□ -1.81
CSMD3-205ENST00000462254 SELENOIQ9C0D9 397 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms