RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 ING4Q9UNL4 249 aa3.35□□□□□ -1.87
CNN3-204ENST00000461018 PSG11Q9UQ72 335 aa3.35□□□□□ -1.87
CNN3-204ENST00000461018 ZNF256Q9Y2P7 627 aaPredicted RBP3.35□□□□□ -1.87
CNN3-204ENST00000461018 MRPS28Q9Y2Q9 187 aaKnown RBP3.35□□□□□ -1.87
CNN3-204ENST00000461018 MOB4Q9Y3A3 225 aa3.35□□□□□ -1.87
CNN3-204ENST00000461018 TPRKBQ9Y3C4 175 aa3.35□□□□□ -1.87
CNN3-204ENST00000461018 HILPDAQ9Y5L2 63 aa3.35□□□□□ -1.87
CNN3-204ENST00000461018 FLG2Q5D862 2391 aaPredicted RBP3.34□□□□□ -1.87
CNN3-204ENST00000461018 AIPO00170 330 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 ITGB1BP1O14713 200 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 LDLRAD4O15165 306 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 SLC22A1O15245 554 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 LANCL1O43813 399 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 PDCD6O75340 191 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 UCHL1P09936 223 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 RBMY1A1P0DJD3 496 aaKnown RBP3.34□□□□□ -1.87
CNN3-204ENST00000461018 CALCBP10092 127 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 MGMTP16455 207 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 SERPINA2P20848 420 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 GALP22466 123 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 NFYBP25208 207 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 CNTFRP26992 372 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 CD1BP29016 333 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 RAB25P57735 213 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 HTD2P86397 168 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 GABPB1Q06547 395 aaPredicted RBP3.34□□□□□ -1.87
CNN3-204ENST00000461018 MLLT11Q13015 90 aaPredicted RBP3.34□□□□□ -1.87
CNN3-204ENST00000461018 ACSM3Q53FZ2 586 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 ATAD3CQ5T2N8 411 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 GLT8D1Q68CQ7 371 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 RAB12Q6IQ22 244 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 FAM71F2Q6NXP2 309 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 TMEM88Q6PEY1 159 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 GLIPR1L1Q6UWM5 242 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 SLC25A48Q6ZT89 311 aaKnown RBP3.34□□□□□ -1.87
CNN3-204ENST00000461018 MOB1BQ7L9L4 216 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 PRSS48Q7RTY5 328 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 OR2W3Q7Z3T1 314 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 CENPVQ7Z7K6 275 aaPredicted RBP3.34□□□□□ -1.87
CNN3-204ENST00000461018 TGIF2LXQ8IUE1 241 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 JAGN1Q8N5M9 183 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 ZNF439Q8NDP4 499 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 TMEM104Q8NE00 496 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 BPIFB6Q8NFQ5 453 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 OR4X2Q8NGF9 303 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 OR10K1Q8NGX5 313 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 OR10X1Q8NGY0 326 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 KCNG3Q8TAE7 436 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 PLPPR1Q8TBJ4 325 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 MRGPRDQ8TDS7 321 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 NEK7Q8TDX7 302 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 ARL11Q969Q4 196 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 CHCHD6Q9BRQ6 235 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 CENPOQ9BU64 300 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 MCRIP2Q9BUT9 160 aaKnown RBP3.34□□□□□ -1.87
CNN3-204ENST00000461018 ST6GALNAC5Q9BVH7 336 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 TM2D1Q9BX74 207 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 RIMS4Q9H426 269 aaPredicted RBP3.34□□□□□ -1.87
CNN3-204ENST00000461018 MAP6D1Q9H9H5 199 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 ZFP57Q9NU63 452 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 LIN7CQ9NUP9 197 aaKnown RBP3.34□□□□□ -1.87
CNN3-204ENST00000461018 JPT1Q9UK76 154 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 TRAPPC2LQ9UL33 140 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 BLOC1S6Q9UL45 172 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 MGAT4AQ9UM21 535 aa3.34□□□□□ -1.87
CNN3-204ENST00000461018 LSM2Q9Y333 95 aaKnown RBP3.34□□□□□ -1.87
CNN3-204ENST00000461018 TRBV6-6A0A0A6YYG2 114 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 IGHV1-3A0A0C4DH29 117 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 MEX3AA1L020 520 aaKnown RBP3.33□□□□□ -1.88
CNN3-204ENST00000461018 MAGEA13PA6NCF6 341 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 TMEM14DPA8MWL7 114 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 C12orf77C9JDV5 145 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 SDCBPO00560 298 aaPredicted RBP3.33□□□□□ -1.88
CNN3-204ENST00000461018 SLC17A2O00624 439 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 HSPB6O14558 160 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 HSD17B6O14756 317 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 YPEL1O60688 119 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 CRTAPO75718 401 aaPredicted RBP3.33□□□□□ -1.88
CNN3-204ENST00000461018 RGS11O94810 467 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 BRI3O95415 125 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 DIRAS3O95661 229 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 NAPSAO96009 420 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 IGHG2P01859 326 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 MAS1P04201 325 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 SRMP19623 302 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 CRHBPP24387 322 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 HTR2CP28335 458 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 SSTR5P35346 364 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 RPS27AP62979 156 aaKnown RBP3.33□□□□□ -1.88
CNN3-204ENST00000461018 MED22Q15528 200 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 TBCEQ15813 527 aaPredicted RBP3.33□□□□□ -1.88
CNN3-204ENST00000461018 DEFB136Q30KP8 78 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 ABCA11PQ4W5N1 156 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 HSD17B12Q53GQ0 312 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 RBM48Q5RL73 367 aaKnown RBP3.33□□□□□ -1.88
CNN3-204ENST00000461018 SYT6Q5T7P8 510 aaPredicted RBP3.33□□□□□ -1.88
CNN3-204ENST00000461018 ASPHD1Q5U4P2 390 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 SIGIRRQ6IA17 410 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 BAIAP2L2Q6UXY1 529 aa3.33□□□□□ -1.88
CNN3-204ENST00000461018 LRRTM1Q86UE6 522 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms