RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	ARFRP1	Q13795	201 aa		10.15	□□□□□ -0.78
SNHG17-208	ENST00000456953	HAGH	Q16775	308 aa		10.15	□□□□□ -0.78
SNHG17-208	ENST00000456953	LTC4S	Q16873	150 aa		10.15	□□□□□ -0.78
SNHG17-208	ENST00000456953	PLAC9	Q5JTB6	97 aa		10.15	□□□□□ -0.78
SNHG17-208	ENST00000456953	FAM53A	Q6NSI3	398 aa	Predicted RBP	10.15	□□□□□ -0.78
SNHG17-208	ENST00000456953	CNIH2	Q6PI25	160 aa		10.15	□□□□□ -0.78
SNHG17-208	ENST00000456953	ARPC1A	Q92747	370 aa		10.15	□□□□□ -0.78
SNHG17-208	ENST00000456953	DIRAS2	Q96HU8	199 aa		10.15	□□□□□ -0.78
SNHG17-208	ENST00000456953	SULT4A1	Q9BR01	284 aa		10.15	□□□□□ -0.78
SNHG17-208	ENST00000456953	PECR	Q9BY49	303 aa		10.15	□□□□□ -0.78
SNHG17-208	ENST00000456953	MIXL1	Q9H2W2	232 aa		10.15	□□□□□ -0.78
SNHG17-208	ENST00000456953	CHMP1A	Q9HD42	196 aa	Predicted RBP	10.15	□□□□□ -0.78
SNHG17-208	ENST00000456953	KIF25	Q9UIL4	384 aa		10.15	□□□□□ -0.78
SNHG17-208	ENST00000456953	TNC	P24821	2201 aa		10.15	□□□□□ -0.78
SNHG17-208	ENST00000456953		A0A1W2PPE3	182 aa		10.14	□□□□□ -0.79
SNHG17-208	ENST00000456953	TMEM30CP	A0ZSE6	113 aa		10.14	□□□□□ -0.79
SNHG17-208	ENST00000456953	FOXI3	A8MTJ6	420 aa	Predicted RBP	10.14	□□□□□ -0.79
SNHG17-208	ENST00000456953	LINC01619	G3V211	115 aa		10.14	□□□□□ -0.79
SNHG17-208	ENST00000456953	CA11	O75493	328 aa		10.14	□□□□□ -0.79
SNHG17-208	ENST00000456953	GSTP1	P09211	210 aa	Known RBP	10.14	□□□□□ -0.79
SNHG17-208	ENST00000456953	CD3G	P09693	182 aa		10.14	□□□□□ -0.79
SNHG17-208	ENST00000456953	SLURP1	P55000	103 aa		10.14	□□□□□ -0.79
SNHG17-208	ENST00000456953	TAS2R20	P59543	309 aa		10.14	□□□□□ -0.79
SNHG17-208	ENST00000456953	GNG2	P59768	71 aa		10.14	□□□□□ -0.79
SNHG17-208	ENST00000456953	CDNF	Q49AH0	187 aa		10.14	□□□□□ -0.79
SNHG17-208	ENST00000456953	RFESD	Q8TAC1	157 aa		10.14	□□□□□ -0.79
SNHG17-208	ENST00000456953	OR4C12	Q96R67	309 aa		10.14	□□□□□ -0.79
SNHG17-208	ENST00000456953	CMSS1	Q9BQ75	279 aa	Known RBP	10.14	□□□□□ -0.79
SNHG17-208	ENST00000456953	ZNF107	Q9UII5	783 aa	Predicted RBP	10.14	□□□□□ -0.79
SNHG17-208	ENST00000456953	AK3	Q9UIJ7	227 aa		10.14	□□□□□ -0.79
SNHG17-208	ENST00000456953	TMEM235	A6NFC5	223 aa		10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	MFNG	O00587	321 aa		10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	TNFSF8	P32971	234 aa		10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	SSTR5	P35346	364 aa		10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	RAB9A	P51151	201 aa		10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	F2RL1	P55085	397 aa		10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	PITPNA	Q00169	270 aa		10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	HACD4	Q5VWC8	232 aa		10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	RSBN1	Q5VWQ0	802 aa	Predicted RBP	10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	SNX29P2	Q8IUI4	249 aa		10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	PLPPR1	Q8TBJ4	325 aa		10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	SETD6	Q8TBK2	473 aa		10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	MRGPRD	Q8TDS7	321 aa		10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	DDB2	Q92466	427 aa		10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	ALX4	Q9H161	411 aa	Predicted RBP	10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	AUNIP	Q9H7T9	357 aa		10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	C12orf4	Q9NQ89	552 aa		10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	TRAPPC2L	Q9UL33	140 aa		10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	KCNK7	Q9Y2U2	307 aa		10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	WSB1	Q9Y6I7	421 aa		10.13	□□□□□ -0.79
SNHG17-208	ENST00000456953	HECTD4	Q9Y4D8	3996 aa		10.12	□□□□□ -0.79
SNHG17-208	ENST00000456953	FABP12	A6NFH5	140 aa		10.12	□□□□□ -0.79
SNHG17-208	ENST00000456953		G3V318	75 aa		10.12	□□□□□ -0.79
SNHG17-208	ENST00000456953	SLC25A17	O43808	307 aa		10.12	□□□□□ -0.79
SNHG17-208	ENST00000456953	PAX5	Q02548	391 aa		10.12	□□□□□ -0.79
SNHG17-208	ENST00000456953	IL18	Q14116	193 aa		10.12	□□□□□ -0.79
SNHG17-208	ENST00000456953	SPANXN2	Q5MJ10	180 aa		10.12	□□□□□ -0.79
SNHG17-208	ENST00000456953	ZNF497	Q6ZNH5	498 aa		10.12	□□□□□ -0.79
SNHG17-208	ENST00000456953	LINC00311	Q8N616	119 aa		10.12	□□□□□ -0.79
SNHG17-208	ENST00000456953	C8orf31	Q8N9H6	132 aa		10.12	□□□□□ -0.79
SNHG17-208	ENST00000456953	OR4K15	Q8NH41	348 aa		10.12	□□□□□ -0.79
SNHG17-208	ENST00000456953	C15orf40	Q8WUR7	153 aa		10.12	□□□□□ -0.79
SNHG17-208	ENST00000456953	CCDC107	Q8WV48	283 aa		10.12	□□□□□ -0.79
SNHG17-208	ENST00000456953	LINC00476	Q8WZB0	136 aa		10.12	□□□□□ -0.79
SNHG17-208	ENST00000456953	TOLLIP	Q9H0E2	274 aa		10.12	□□□□□ -0.79
SNHG17-208	ENST00000456953	RIMS4	Q9H426	269 aa	Predicted RBP	10.12	□□□□□ -0.79
SNHG17-208	ENST00000456953	KIAA1109	Q2LD37	5005 aa		10.12	□□□□□ -0.79
SNHG17-208	ENST00000456953	KMT2A	Q03164	3969 aa		10.11	□□□□□ -0.79
SNHG17-208	ENST00000456953	ZNF736	B4DX44	427 aa	Predicted RBP	10.11	□□□□□ -0.79
SNHG17-208	ENST00000456953	TXNL1	O43396	289 aa		10.11	□□□□□ -0.79
SNHG17-208	ENST00000456953	IGLV1-51	P01701	117 aa		10.11	□□□□□ -0.79
SNHG17-208	ENST00000456953	MT-ND4	P03905	459 aa		10.11	□□□□□ -0.79
SNHG17-208	ENST00000456953	LGALS1	P09382	135 aa	Known RBP	10.11	□□□□□ -0.79
SNHG17-208	ENST00000456953	IL3RA	P26951	378 aa		10.11	□□□□□ -0.79
SNHG17-208	ENST00000456953	FAM131A	Q6UXB0	335 aa		10.11	□□□□□ -0.79
SNHG17-208	ENST00000456953	NUDCD2	Q8WVJ2	157 aa		10.11	□□□□□ -0.79
SNHG17-208	ENST00000456953	CYYR1	Q96J86	154 aa		10.11	□□□□□ -0.79
SNHG17-208	ENST00000456953	HDHD3	Q9BSH5	251 aa	Predicted RBP	10.11	□□□□□ -0.79
SNHG17-208	ENST00000456953	ELOVL1	Q9BW60	279 aa		10.11	□□□□□ -0.79
SNHG17-208	ENST00000456953	TPSG1	Q9NRR2	321 aa		10.11	□□□□□ -0.79
SNHG17-208	ENST00000456953	KCNIP1	Q9NZI2	227 aa		10.11	□□□□□ -0.79
SNHG17-208	ENST00000456953	RABL2A	Q9UBK7	228 aa	Predicted RBP	10.11	□□□□□ -0.79
SNHG17-208	ENST00000456953	RABL2B	Q9UNT1	228 aa		10.11	□□□□□ -0.79
SNHG17-208	ENST00000456953	IGHV4OR15-8	A0A075B7B6	117 aa		10.1	□□□□□ -0.79
SNHG17-208	ENST00000456953		A0A087WW49	117 aa		10.1	□□□□□ -0.79
SNHG17-208	ENST00000456953	TRAV39	A0A0B4J263	110 aa		10.1	□□□□□ -0.79
SNHG17-208	ENST00000456953	TRAV41	A0A0B4J266	112 aa		10.1	□□□□□ -0.79
SNHG17-208	ENST00000456953	ATP6V0E1	O15342	81 aa		10.1	□□□□□ -0.79
SNHG17-208	ENST00000456953	TPPP	O94811	219 aa		10.1	□□□□□ -0.79
SNHG17-208	ENST00000456953	HLA-DQB1	P01920	261 aa		10.1	□□□□□ -0.79
SNHG17-208	ENST00000456953	PTHLH	P12272	177 aa		10.1	□□□□□ -0.79
SNHG17-208	ENST00000456953	CNTFR	P26992	372 aa		10.1	□□□□□ -0.79
SNHG17-208	ENST00000456953	PRSS3	P35030	304 aa		10.1	□□□□□ -0.79
SNHG17-208	ENST00000456953	C6orf183	Q5T699	404 aa		10.1	□□□□□ -0.79
SNHG17-208	ENST00000456953	PYHIN1	Q6K0P9	492 aa		10.1	□□□□□ -0.79
SNHG17-208	ENST00000456953	MOB1B	Q7L9L4	216 aa		10.1	□□□□□ -0.79
SNHG17-208	ENST00000456953	HAPLN4	Q86UW8	402 aa		10.1	□□□□□ -0.79
SNHG17-208	ENST00000456953	MINDY2	Q8NBR6	621 aa		10.1	□□□□□ -0.79
SNHG17-208	ENST00000456953	OR52M1	Q8NGK5	317 aa		10.1	□□□□□ -0.79

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