RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 TLE1Q04724 770 aa9.77□□□□□ -0.85
VTA1-203ENST00000452973 TNFRSF9Q07011 255 aa9.77□□□□□ -0.85
VTA1-203ENST00000452973 MSMO1Q15800 293 aa9.77□□□□□ -0.85
VTA1-203ENST00000452973 TRAT1Q6PIZ9 186 aa9.77□□□□□ -0.85
VTA1-203ENST00000452973 CD55P08174 381 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 SNCAP37840 140 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 GATA4P43694 442 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 CEBPGP53567 150 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 DVL1P1P54792 670 aaPredicted RBP9.76□□□□□ -0.85
VTA1-203ENST00000452973 GUK1Q16774 197 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 AKR1C8PQ5T2L2 129 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 CBLN2Q8IUK8 224 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 NUP37Q8NFH4 326 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 C14orf79Q96F83 325 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 OR6C3Q9NZP0 311 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 TRGV10A0A0A0MS01 117 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 MARCH11A6NNE9 402 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 C17orf100A8MU93 164 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 ZG16O60844 167 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 NPBWR1P48145 328 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 LOXL3P58215 753 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 CCL20P78556 96 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 EIF4EBP1Q13541 118 aaPredicted RBP9.76□□□□□ -0.85
VTA1-203ENST00000452973 ZNF273Q14593 569 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 ZNF561Q8N587 486 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 SCGB1C1Q8TD33 95 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 SFT2D1Q8WV19 159 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 HSD17B10Q99714 261 aaKnown RBP9.76□□□□□ -0.85
VTA1-203ENST00000452973 SAP30LQ9HAJ7 183 aa9.76□□□□□ -0.85
VTA1-203ENST00000452973 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.76□□□□□ -0.85
VTA1-203ENST00000452973 SPTBN1Q01082 2364 aaKnown RBP9.76□□□□□ -0.85
VTA1-203ENST00000452973 LRRC30A6NM36 301 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 CEBPZOSA8MTT3 80 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 DUTP33316 252 aaKnown RBP9.75□□□□□ -0.85
VTA1-203ENST00000452973 AKR1C3P42330 323 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 STUMQ69YW2 141 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 LINC01560Q8TB33 94 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 R3HDM4Q96D70 268 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 GAFA1Q96PS6 74 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 ZNRD1Q9P1U0 126 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 JPT1Q9UK76 154 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 ANKHD1Q8IWZ3 2542 aaKnown RBP9.75□□□□□ -0.85
VTA1-203ENST00000452973 DNASE2O00115 360 aaPredicted RBP9.75□□□□□ -0.85
VTA1-203ENST00000452973 WNT2P09544 360 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 H2AFB1P0C5Y9 115 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 TNFRSF1AP19438 455 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 RAB5CP51148 216 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 C17orf58Q2M2W7 97 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 HAPLN4Q86UW8 402 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 GNPNAT1Q96EK6 184 aaPredicted RBP9.75□□□□□ -0.85
VTA1-203ENST00000452973 RARRES2Q99969 163 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 SEC11CQ9BY50 192 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 ZNF665Q9H7R5 613 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 DYNLRB1Q9NP97 96 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 STRAPQ9Y3F4 350 aaKnown RBP9.75□□□□□ -0.85
VTA1-203ENST00000452973 UBE2L5PA0A1B0GUS4 154 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 MMP23AO75900 390 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 DFFBO76075 338 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 IFNA17P01571 189 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 CD5P06127 495 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 PLA2G5P39877 138 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 ZNF66Q6ZN08 573 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 C1orf229Q6ZS94 237 aaPredicted RBP9.75□□□□□ -0.85
VTA1-203ENST00000452973 LYG1Q8N1E2 194 aa9.75□□□□□ -0.85
VTA1-203ENST00000452973 RAI1Q7Z5J4 1906 aaPredicted RBP9.75□□□□□ -0.85
VTA1-203ENST00000452973 OR13C7P0DN81 318 aa9.74□□□□□ -0.85
VTA1-203ENST00000452973 GRNP28799 593 aaKnown RBP9.74□□□□□ -0.85
VTA1-203ENST00000452973 HBG1P69891 147 aa9.74□□□□□ -0.85
VTA1-203ENST00000452973 HBG2P69892 147 aa9.74□□□□□ -0.85
VTA1-203ENST00000452973 HAGHQ16775 308 aa9.74□□□□□ -0.85
VTA1-203ENST00000452973 C20orf24Q9BUV8 137 aa9.74□□□□□ -0.85
VTA1-203ENST00000452973 JKAMPQ9P055 326 aa9.74□□□□□ -0.85
VTA1-203ENST00000452973 YPEL1O60688 119 aa9.74□□□□□ -0.85
VTA1-203ENST00000452973 ELLP55199 621 aaPredicted RBP9.74□□□□□ -0.85
VTA1-203ENST00000452973 CT45A1Q5HYN5 189 aa9.74□□□□□ -0.85
VTA1-203ENST00000452973 PRAMEF5Q5TYX0 476 aa9.74□□□□□ -0.85
VTA1-203ENST00000452973 ETV3LQ6ZN32 361 aa9.74□□□□□ -0.85
VTA1-203ENST00000452973 CT45A3Q8NHU0 189 aa9.74□□□□□ -0.85
VTA1-203ENST00000452973 LYPD6BQ8NI32 183 aa9.74□□□□□ -0.85
VTA1-203ENST00000452973 DTD1Q8TEA8 209 aa9.74□□□□□ -0.85
VTA1-203ENST00000452973 YPEL2Q96QA6 119 aa9.74□□□□□ -0.85
VTA1-203ENST00000452973 OR4C12Q96R67 309 aa9.74□□□□□ -0.85
VTA1-203ENST00000452973 TOLLIPQ9H0E2 274 aa9.74□□□□□ -0.85
VTA1-203ENST00000452973 IFI27L2Q9H2X8 130 aa9.74□□□□□ -0.85
VTA1-203ENST00000452973 HCFC1P51610 2035 aa9.73□□□□□ -0.85
VTA1-203ENST00000452973 KBTBD11-OT1A0A1B0GTJ5 212 aa9.73□□□□□ -0.85
VTA1-203ENST00000452973 OR9G9P0C7N8 305 aa9.73□□□□□ -0.85
VTA1-203ENST00000452973 CASP6P55212 293 aa9.73□□□□□ -0.85
VTA1-203ENST00000452973 TAS2R30P59541 319 aa9.73□□□□□ -0.85
VTA1-203ENST00000452973 SLC38A11Q08AI6 406 aa9.73□□□□□ -0.85
VTA1-203ENST00000452973 ZNF525Q8N782 197 aa9.73□□□□□ -0.85
VTA1-203ENST00000452973 FAM222BQ8WU58 562 aa9.73□□□□□ -0.85
VTA1-203ENST00000452973 H1FXQ92522 213 aaKnown RBP9.73□□□□□ -0.85
VTA1-203ENST00000452973 SDSLQ96GA7 329 aa9.73□□□□□ -0.85
VTA1-203ENST00000452973 S1PR3Q99500 378 aa9.73□□□□□ -0.85
VTA1-203ENST00000452973 QTRT1Q9BXR0 403 aaKnown RBP9.73□□□□□ -0.85
VTA1-203ENST00000452973 VSIRQ9H7M9 311 aa9.73□□□□□ -0.85
VTA1-203ENST00000452973 HSPB7Q9UBY9 170 aa9.73□□□□□ -0.85
VTA1-203ENST00000452973 TRIM77I1YAP6 450 aa9.73□□□□□ -0.85
VTA1-203ENST00000452973 CCL21O00585 134 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms