RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 Q6ZRM9 215 aa11.68□□□□□ -0.54
USP39-207ENST00000450066 SLC51BQ86UW2 128 aa11.68□□□□□ -0.54
USP39-207ENST00000450066 ZNF596Q8TC21 504 aa11.68□□□□□ -0.54
USP39-207ENST00000450066 S1PR3Q99500 378 aa11.68□□□□□ -0.54
USP39-207ENST00000450066 PLEKHA2Q9HB19 425 aa11.68□□□□□ -0.54
USP39-207ENST00000450066 RCL1Q9Y2P8 373 aaKnown RBP11.68□□□□□ -0.54
USP39-207ENST00000450066 MSGN1A6NI15 193 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 F5H0A9 414 aaPredicted RBP11.67□□□□□ -0.54
USP39-207ENST00000450066 IFNA7P01567 189 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 RBP4P02753 201 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 EPHA1P21709 976 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 KIR2DS2P43631 304 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 LINC00311Q8N616 119 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 DDB2Q92466 427 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 ADTRPQ96IZ2 230 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 COA4Q9NYJ1 87 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 CACNG5Q9UF02 275 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 MALRD1Q5VYJ5 2156 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 PPIAL4CA0A0B4J2A2 164 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 FCGR3BO75015 233 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 KRASP01116 189 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 P0C879 139 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 PPIAL4GP0DN37 164 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 HKR1P10072 659 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 RPL12P30050 165 aaKnown RBP11.67□□□□□ -0.54
USP39-207ENST00000450066 THBS3P49746 956 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 GNB2P62879 340 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 LY6G5BQ8NDX9 201 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 DMBX1Q8NFW5 382 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 ARPC5LQ9BPX5 153 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 SESN1Q9Y6P5 492 aa11.67□□□□□ -0.54
USP39-207ENST00000450066 HPRT1P00492 218 aa11.66□□□□□ -0.54
USP39-207ENST00000450066 CFDP00746 253 aaPredicted RBP11.66□□□□□ -0.54
USP39-207ENST00000450066 G6PCP35575 357 aa11.66□□□□□ -0.54
USP39-207ENST00000450066 P2RY1P47900 373 aa11.66□□□□□ -0.54
USP39-207ENST00000450066 IZUMO4Q1ZYL8 232 aa11.66□□□□□ -0.54
USP39-207ENST00000450066 TMEM133Q9H2Q1 129 aa11.66□□□□□ -0.54
USP39-207ENST00000450066 C11orf1Q9H5F2 150 aa11.66□□□□□ -0.54
USP39-207ENST00000450066 CRYBG3Q68DQ2 2970 aa11.66□□□□□ -0.54
USP39-207ENST00000450066 ASH1LQ9NR48 2969 aaKnown RBP11.66□□□□□ -0.54
USP39-207ENST00000450066 DOCK11Q5JSL3 2073 aa11.66□□□□□ -0.54
USP39-207ENST00000450066 KIAA1324LA8MWY0 1029 aaPredicted RBP11.66□□□□□ -0.54
USP39-207ENST00000450066 J3QR06 171 aa11.66□□□□□ -0.54
USP39-207ENST00000450066 MMP9P14780 707 aa11.66□□□□□ -0.54
USP39-207ENST00000450066 PVALBP20472 110 aaPredicted RBP11.66□□□□□ -0.54
USP39-207ENST00000450066 POLR2GP62487 172 aaKnown RBP eCLIP11.66□□□□□ -0.54
USP39-207ENST00000450066 EXOSC2Q13868 293 aaKnown RBP11.66□□□□□ -0.54
USP39-207ENST00000450066 GPR157Q5UAW9 335 aa11.66□□□□□ -0.54
USP39-207ENST00000450066 ZNF833PQ6ZTB9 187 aa11.66□□□□□ -0.54
USP39-207ENST00000450066 OR9G1Q8NH87 305 aa11.66□□□□□ -0.54
USP39-207ENST00000450066 CCL19Q99731 98 aa11.66□□□□□ -0.54
USP39-207ENST00000450066 SSBP3Q9BWW4 388 aaPredicted RBP11.66□□□□□ -0.54
USP39-207ENST00000450066 ZNRD1Q9P1U0 126 aa11.66□□□□□ -0.54
USP39-207ENST00000450066 MARCH11A6NNE9 402 aa11.65□□□□□ -0.54
USP39-207ENST00000450066 LIPFP07098 398 aa11.65□□□□□ -0.54
USP39-207ENST00000450066 ABHD12Q8N2K0 398 aa11.65□□□□□ -0.54
USP39-207ENST00000450066 OR4S2Q8NH73 311 aa11.65□□□□□ -0.54
USP39-207ENST00000450066 MAGT1Q9H0U3 335 aa11.65□□□□□ -0.54
USP39-207ENST00000450066 NARFLQ9H6Q4 476 aa11.65□□□□□ -0.54
USP39-207ENST00000450066 hCG_1809904A0A1W2PP81 198 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 A0A1W2PPE2 198 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 A0A1W2PR64 198 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 A0A1W2PRV1 198 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 C22orf46C9J442 243 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 SSSCA1O60232 199 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 IGHV4-39P01824 125 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 UBA52P62987 128 aaKnown RBP11.64□□□□□ -0.55
USP39-207ENST00000450066 NDUFA5Q16718 116 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 FAM71F2Q6NXP2 309 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 ZNF525Q8N782 197 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 ZNF383Q8NA42 475 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 OR10X1Q8NGY0 326 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 TNFRSF14Q92956 283 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 ZNF471Q9BX82 626 aaPredicted RBP11.64□□□□□ -0.55
USP39-207ENST00000450066 ZC4H2Q9NQZ6 224 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 UBQLN2Q9UHD9 624 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 FAM208BQ5VWN6 2430 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 AKAP6Q13023 2319 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 LOC105371242A0A075B767 164 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 FAM90A26D6RGX4 464 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 WRBO00258 174 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 TOR1AO14656 332 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 TAAR5O14804 337 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 CHST1O43916 411 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 SPDEFO95238 335 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 CT45A6P0DMU7 189 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 CT45A5P0DMU8 189 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 CT45A7P0DMV0 189 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 COX6B1P14854 86 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 H2BFWTQ7Z2G1 175 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 R3HDM4Q96D70 268 aa11.64□□□□□ -0.55
USP39-207ENST00000450066 FAM90A9PA6NNJ1 464 aa11.63□□□□□ -0.55
USP39-207ENST00000450066 GPR137BO60478 399 aa11.63□□□□□ -0.55
USP39-207ENST00000450066 NQO2P16083 231 aa11.63□□□□□ -0.55
USP39-207ENST00000450066 ZNF137PP52743 207 aa11.63□□□□□ -0.55
USP39-207ENST00000450066 VAMP2P63027 116 aa11.63□□□□□ -0.55
USP39-207ENST00000450066 MIDNQ504T8 468 aa11.63□□□□□ -0.55
USP39-207ENST00000450066 SP5Q6BEB4 398 aaPredicted RBP11.63□□□□□ -0.55
USP39-207ENST00000450066 ST8SIA2Q92186 375 aa11.63□□□□□ -0.55
USP39-207ENST00000450066 TMEM186Q96B77 213 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms