RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 C1QCP02747 245 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 MUC1P15941 1255 aaPredicted RBP12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 LEAP2Q969E1 77 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 UBR3Q6ZT12 1888 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 SYNGR3O43761 229 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 FSTP19883 344 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 RELBQ01201 579 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 DCAF12L2Q5VW00 463 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 MARF1Q9Y4F3 1742 aaKnown RBP12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 DSPPQ9NZW4 1301 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 MCM3APO60318 1980 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 ODAMA1E959 279 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 THY1P04216 161 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 CTSBP07858 339 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 SAPCD1Q5SSQ6 148 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 PKIBQ9C010 78 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 IGKV3D-11A0A0A0MRZ8 115 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 H3BVH4 76 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 TRGC2P03986 189 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 IGKV3-11P04433 115 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 EIF4EBP2Q13542 120 aaPredicted RBP12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 B9A039 149 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 ZNF324O75467 553 aaPredicted RBP12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 TRPM6Q9BX84 2022 aa12.03□□□□□ -0.48
RAPGEF3-205ENST00000449771 NPIPB6E9PJ23 425 aa12.02□□□□□ -0.48
RAPGEF3-205ENST00000449771 FOXH1O75593 365 aa12.02□□□□□ -0.48
RAPGEF3-205ENST00000449771 PNKDQ8N490 385 aa12.02□□□□□ -0.48
RAPGEF3-205ENST00000449771 ALX4Q9H161 411 aaPredicted RBP12.02□□□□□ -0.48
RAPGEF3-205ENST00000449771 ZNF729A6NN14 1252 aaPredicted RBP12.02□□□□□ -0.48
RAPGEF3-205ENST00000449771 LIPFP07098 398 aa12.02□□□□□ -0.48
RAPGEF3-205ENST00000449771 CXorf66Q5JRM2 361 aaPredicted RBP12.02□□□□□ -0.48
RAPGEF3-205ENST00000449771 OR1P1Q8NH06 330 aa12.02□□□□□ -0.48
RAPGEF3-205ENST00000449771 MRPS18AQ9NVS2 196 aaKnown RBP12.02□□□□□ -0.48
RAPGEF3-205ENST00000449771 CLEC7AQ9BXN2 247 aa12.02□□□□□ -0.49
RAPGEF3-205ENST00000449771 KCNK7Q9Y2U2 307 aa12.02□□□□□ -0.49
RAPGEF3-205ENST00000449771 SIRT4Q9Y6E7 314 aaPredicted RBP12.02□□□□□ -0.49
RAPGEF3-205ENST00000449771 REG1AP05451 166 aa12.02□□□□□ -0.49
RAPGEF3-205ENST00000449771 MMP9P14780 707 aa12.02□□□□□ -0.49
RAPGEF3-205ENST00000449771 BTF3P20290 206 aaKnown RBP12.02□□□□□ -0.49
RAPGEF3-205ENST00000449771 GCSHP23434 173 aa12.02□□□□□ -0.49
RAPGEF3-205ENST00000449771 LIMS1P48059 325 aa12.02□□□□□ -0.49
RAPGEF3-205ENST00000449771 WDFY1Q8IWB7 410 aa12.02□□□□□ -0.49
RAPGEF3-205ENST00000449771 A0A1W2PP11 408 aa12.02□□□□□ -0.49
RAPGEF3-205ENST00000449771 DLL3Q9NYJ7 618 aa12.02□□□□□ -0.49
RAPGEF3-205ENST00000449771 LMX1BO60663 402 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 RCC1P18754 421 aaPredicted RBP12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 ZNF345Q14585 488 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 ZNF430Q9H8G1 570 aaPredicted RBP12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 CD1AP06126 327 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 RND2P52198 227 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 PSG9Q00887 426 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 HERPUD1Q15011 391 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 ACSF3Q4G176 576 aaPredicted RBP12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 AMELYQ99218 206 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 HSPB7Q9UBY9 170 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 TCTAP57738 103 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 OR9G1Q8NH87 305 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 EEF1AKMT3Q96AZ1 226 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 FOXD3Q9UJU5 478 aaPredicted RBP12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 LHFPL6Q9Y693 200 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 TRAV30A0A087WSZ9 112 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 GREM1O60565 184 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 TIAF1O95411 115 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 CFDP00746 253 aaPredicted RBP12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 HOXA6P31267 233 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 FUT5Q11128 374 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 ZNF502Q8TBZ5 544 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 TIMP4Q99727 224 aa12.01□□□□□ -0.49
RAPGEF3-205ENST00000449771 IGLV1-36A0A0B4J1U3 117 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 PGLYRP1O75594 196 aaPredicted RBP12□□□□□ -0.49
RAPGEF3-205ENST00000449771 WISP3O95389 354 aaPredicted RBP12□□□□□ -0.49
RAPGEF3-205ENST00000449771 SSTR5P35346 364 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 PRSS53Q2L4Q9 553 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 UQCR10Q9UDW1 63 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 KIAA1217Q5T5P2 1943 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 C7orf66A4D0T2 115 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 SEC11BP0C7V7 166 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 MDKP21741 143 aaPredicted RBP12□□□□□ -0.49
RAPGEF3-205ENST00000449771 APOBEC3AP31941 199 aaPredicted RBP12□□□□□ -0.49
RAPGEF3-205ENST00000449771 WDR25Q64LD2 544 aaPredicted RBP12□□□□□ -0.49
RAPGEF3-205ENST00000449771 FAM90A10PA6NDY2 464 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 FAM90A18PA6NE21 464 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 FAM90A16PA6NEW6 464 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 FAM90A20PA6NIJ5 464 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 FAM90A8PA6NJQ4 464 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 FAM90A7PA6NKC0 464 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 FAM90A22PA8MWA6 464 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 FAM90A12PA8MX19 464 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 FAM90A5PA8MXJ8 464 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 FAM90A23PA8MXZ1 464 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 FAM90A15PP0C7V4 464 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 FAM90A13PP0C7W8 464 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 FAM90A14PP0C7W9 464 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 FAM90A24PP0C7X0 464 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 SELENOTP62341 195 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 RUNX1Q01196 453 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 VAX1Q5SQQ9 334 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 TMEM222Q9H0R3 208 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 COL24A1Q17RW2 1714 aa12□□□□□ -0.49
RAPGEF3-205ENST00000449771 C4orf51C9J302 202 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms