RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 A0A1B0GVG6 124 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 C9orf170A2RU37 121 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 VGLL3A8MV65 326 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 CD5LO43866 347 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 SFT2D2O95562 160 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 EPHA1P21709 976 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 F2RP25116 425 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 DHODHQ02127 395 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 SSX2Q16385 188 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 FAM71F2Q6NXP2 309 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 C11orf88Q6PI97 169 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 GPN1Q9HCN4 374 aaPredicted RBP11.84□□□□□ -0.51
TNF-208ENST00000449264 TBL2Q9Y4P3 447 aaKnown RBP11.84□□□□□ -0.51
TNF-208ENST00000449264 A0A0A6YYJ9 748 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 A8MV72 311 aaPredicted RBP11.84□□□□□ -0.51
TNF-208ENST00000449264 H0Y980 276 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 LY6LH3BQJ8 138 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 CREBL2O60519 120 aaPredicted RBP11.84□□□□□ -0.51
TNF-208ENST00000449264 IFNA2P01563 188 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 IL5P05113 134 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 CT45A6P0DMU7 189 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 CT45A5P0DMU8 189 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 CT45A7P0DMV0 189 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 ANXA3P12429 323 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 THBS3P49746 956 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 MIDNQ504T8 468 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 MINOS1Q5TGZ0 78 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 SPNS3Q6ZMD2 512 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 ZNF383Q8NA42 475 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 ZNF431Q8TF32 576 aaPredicted RBP11.84□□□□□ -0.51
TNF-208ENST00000449264 RBMXL1Q96E39 390 aaKnown RBP11.84□□□□□ -0.51
TNF-208ENST00000449264 SMR3AQ99954 134 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 YAE1D1Q9NRH1 226 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 KCNIP3Q9Y2W7 256 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 MINOS1-NBL1R4GNA1 71 aa11.84□□□□□ -0.51
TNF-208ENST00000449264 HIVEP1P15822 2718 aa11.83□□□□□ -0.52
TNF-208ENST00000449264 IGHV3-72A0A0B4J1Y9 119 aa11.83□□□□□ -0.52
TNF-208ENST00000449264 IGHV1-3A0A0C4DH29 117 aa11.83□□□□□ -0.52
TNF-208ENST00000449264 FCGR3BO75015 233 aa11.83□□□□□ -0.52
TNF-208ENST00000449264 GAPDHP04406 335 aaKnown RBP11.83□□□□□ -0.52
TNF-208ENST00000449264 ZNF816Q0VGE8 651 aaPredicted RBP11.83□□□□□ -0.52
TNF-208ENST00000449264 LIN54Q6MZP7 749 aa11.83□□□□□ -0.52
TNF-208ENST00000449264 MOB3BQ86TA1 216 aa11.83□□□□□ -0.52
TNF-208ENST00000449264 SPAG16Q8N0X2 631 aa11.83□□□□□ -0.52
TNF-208ENST00000449264 UXS1Q8NBZ7 420 aa11.83□□□□□ -0.52
TNF-208ENST00000449264 GALNT14Q96FL9 552 aa11.83□□□□□ -0.52
TNF-208ENST00000449264 ADTRPQ96IZ2 230 aa11.83□□□□□ -0.52
TNF-208ENST00000449264 NABP2Q9BQ15 211 aa11.83□□□□□ -0.52
TNF-208ENST00000449264 PRELID3BQ9Y3B1 194 aa11.83□□□□□ -0.52
TNF-208ENST00000449264 A0A1W2PPI3 338 aa11.82□□□□□ -0.52
TNF-208ENST00000449264 C7orf66A4D0T2 115 aa11.82□□□□□ -0.52
TNF-208ENST00000449264 TXNL1O43396 289 aa11.82□□□□□ -0.52
TNF-208ENST00000449264 SSNA1O43805 119 aa11.82□□□□□ -0.52
TNF-208ENST00000449264 RAMP3O60896 148 aa11.82□□□□□ -0.52
TNF-208ENST00000449264 APOA2P02652 100 aa11.82□□□□□ -0.52
TNF-208ENST00000449264 ANKRD55Q3KP44 614 aa11.82□□□□□ -0.52
TNF-208ENST00000449264 IL17RELQ6ZVW7 336 aa11.82□□□□□ -0.52
TNF-208ENST00000449264 DYNAPQ8N1N2 210 aa11.82□□□□□ -0.52
TNF-208ENST00000449264 NANPQ8TBE9 248 aa11.82□□□□□ -0.52
TNF-208ENST00000449264 OR51J1Q9H342 316 aa11.82□□□□□ -0.52
TNF-208ENST00000449264 NAV3Q8IVL0 2385 aa11.82□□□□□ -0.52
TNF-208ENST00000449264 A0A0U1RQK1 487 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 H7C2Y5 167 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 DUS4LO95620 317 aaKnown RBP11.81□□□□□ -0.52
TNF-208ENST00000449264 SERPINE2P07093 398 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 TMEM187Q14656 261 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 GLYATL2Q8WU03 294 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 DDB2Q92466 427 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 PHB2Q99623 299 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 TMEM222Q9H0R3 208 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 SLC35D1Q9NTN3 355 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 SOX21Q9Y651 276 aaPredicted RBP11.81□□□□□ -0.52
TNF-208ENST00000449264 SNRPGP15A8MWD9 76 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 H0YJW9 148 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 TIMM23O14925 209 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 CRYZL1O95825 349 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 CD99P14209 185 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 BRWD1-AS2P59051 145 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 RTL8BQ17RB0 113 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 CCDC144NLQ6NUI1 221 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 LIAT1Q6ZQX7 453 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 COQ8AQ8NI60 647 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 C22orf15Q8WYQ4 148 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 MALSU1Q96EH3 234 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 AJUBAQ96IF1 538 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 NUP50Q9UKX7 468 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 FAM96BQ9Y3D0 163 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 ZFHX3Q15911 3703 aa11.81□□□□□ -0.52
TNF-208ENST00000449264 MTORP42345 2549 aa11.8□□□□□ -0.52
TNF-208ENST00000449264 S1PR2O95136 353 aa11.8□□□□□ -0.52
TNF-208ENST00000449264 UCP1P25874 307 aa11.8□□□□□ -0.52
TNF-208ENST00000449264 KIR2DS2P43631 304 aa11.8□□□□□ -0.52
TNF-208ENST00000449264 FAM120AOSQ5T036 256 aa11.8□□□□□ -0.52
TNF-208ENST00000449264 TMEM268Q5VZI3 342 aa11.8□□□□□ -0.52
TNF-208ENST00000449264 OR8H3Q8N146 312 aa11.8□□□□□ -0.52
TNF-208ENST00000449264 C12orf45Q8N5I9 185 aaPredicted RBP11.8□□□□□ -0.52
TNF-208ENST00000449264 OR5AN1Q8NGI8 311 aa11.8□□□□□ -0.52
TNF-208ENST00000449264 OR4S2Q8NH73 311 aa11.8□□□□□ -0.52
TNF-208ENST00000449264 LHFPL5Q8TAF8 219 aa11.8□□□□□ -0.52
TNF-208ENST00000449264 MITD1Q8WV92 249 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms