RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 RPL31P62899 125 aaKnown RBP8.73□□□□□ -1.01
VIPAS39-203ENST00000448935 CDSNQ15517 529 aa8.73□□□□□ -1.01
VIPAS39-203ENST00000448935 CXorf66Q5JRM2 361 aaPredicted RBP8.73□□□□□ -1.01
VIPAS39-203ENST00000448935 UBAC2Q8NBM4 344 aa8.73□□□□□ -1.01
VIPAS39-203ENST00000448935 ADTRPQ96IZ2 230 aa8.73□□□□□ -1.01
VIPAS39-203ENST00000448935 C11orf1Q9H5F2 150 aa8.73□□□□□ -1.01
VIPAS39-203ENST00000448935 CBLN4Q9NTU7 201 aa8.73□□□□□ -1.01
VIPAS39-203ENST00000448935 CACNG5Q9UF02 275 aa8.73□□□□□ -1.01
VIPAS39-203ENST00000448935 CACFD1Q9UGQ2 172 aa8.73□□□□□ -1.01
VIPAS39-203ENST00000448935 DUTP33316 252 aaKnown RBP8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 CAV2P51636 162 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 TAS2R30P59541 319 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 RPL30P62888 115 aaKnown RBP8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 EWSR1Q01844 656 aaKnown RBP eCLIP8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 ZNF266Q14584 549 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 RPL7L1Q6DKI1 246 aaKnown RBP8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 DUX4L9Q6RFH8 374 aaPredicted RBP8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 BTNL3Q6UXE8 466 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 C5orf30Q96GV9 206 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 ZNF714Q96N38 554 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 IFI27L2Q9H2X8 130 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 RPUSD1Q9UJJ7 312 aaKnown RBP8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 WSB1Q9Y6I7 421 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 SPTA1P02549 2419 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 A0A0G2JRQ6 117 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 MEX3AA1L020 520 aaKnown RBP8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 FAM90A9PA6NNJ1 464 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 C17orf98A8MV24 154 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 M0R1X1 148 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 SYNGR2O43760 224 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 CHST1O43916 411 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 LY86O95711 162 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 HPRT1P00492 218 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 OMGP23515 440 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 NFYBP25208 207 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 THBS3P49746 956 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 MRPS11P82912 194 aaKnown RBP8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 ZNF816Q0VGE8 651 aaPredicted RBP8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 FAM53AQ6NSI3 398 aaPredicted RBP8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 HEPN1Q6WQI6 88 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 TCF23Q7RTU1 214 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 H2BFWTQ7Z2G1 175 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 STX12Q86Y82 276 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 TMEM252Q8N6L7 170 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 PCNPQ8WW12 178 aaKnown RBP8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 NEU4Q8WWR8 484 aaPredicted RBP8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 S1PR3Q99500 378 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 MAGT1Q9H0U3 335 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 ARFGEF3Q5TH69 2177 aa8.72□□□□□ -1.01
VIPAS39-203ENST00000448935 LINC00473A8K010 186 aa8.71□□□□□ -1.02
VIPAS39-203ENST00000448935 NUDT19A8MXV4 375 aa8.71□□□□□ -1.02
VIPAS39-203ENST00000448935 FGF16O43320 207 aa8.71□□□□□ -1.02
VIPAS39-203ENST00000448935 S1PR2O95136 353 aa8.71□□□□□ -1.02
VIPAS39-203ENST00000448935 KRASP01116 189 aa8.71□□□□□ -1.02
VIPAS39-203ENST00000448935 GNLYP22749 145 aa8.71□□□□□ -1.02
VIPAS39-203ENST00000448935 ERVK-16P61578 105 aa8.71□□□□□ -1.02
VIPAS39-203ENST00000448935 CT45A1Q5HYN5 189 aa8.71□□□□□ -1.02
VIPAS39-203ENST00000448935 FAM74A1Q5RGS3 127 aa8.71□□□□□ -1.02
VIPAS39-203ENST00000448935 ZNF439Q8NDP4 499 aa8.71□□□□□ -1.02
VIPAS39-203ENST00000448935 CT45A3Q8NHU0 189 aa8.71□□□□□ -1.02
VIPAS39-203ENST00000448935 TMED6Q8WW62 240 aa8.71□□□□□ -1.02
VIPAS39-203ENST00000448935 ITLN2Q8WWU7 325 aaPredicted RBP8.71□□□□□ -1.02
VIPAS39-203ENST00000448935 H1FXQ92522 213 aaKnown RBP8.71□□□□□ -1.02
VIPAS39-203ENST00000448935 SAT2Q96F10 170 aaPredicted RBP8.71□□□□□ -1.02
VIPAS39-203ENST00000448935 SMIM8Q96KF7 97 aa8.71□□□□□ -1.02
VIPAS39-203ENST00000448935 ARV1Q9H2C2 271 aa8.71□□□□□ -1.02
VIPAS39-203ENST00000448935 A0A1W2PPH5 198 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 FAM24AA6NFZ4 105 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 KIAA1324LA8MWY0 1029 aaPredicted RBP8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 DVL1O14640 695 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 ZG16O60844 167 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 RAMP3O60896 148 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 FCGR3BO75015 233 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 DFFBO76075 338 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 SCAF4O95104 1147 aaKnown RBP8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 SEC11BP0C7V7 166 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 P0C879 139 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 G6PCP35575 357 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 ZNF134P52741 427 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 NHLH2Q02577 135 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 AANATQ16613 207 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 OR2B11Q5JQS5 317 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 NCR3LG1Q68D85 454 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 Q6ZRM9 215 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 SLC25A48Q6ZT89 311 aaKnown RBP8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 HSD17B13Q7Z5P4 300 aaPredicted RBP8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 LYG1Q8N1E2 194 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 EIF4E3Q8N5X7 224 aaKnown RBP8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 OR4S2Q8NH73 311 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 TIMD4Q96H15 378 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 CXorf58Q96LI9 332 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 CIB3Q96Q77 187 aaPredicted RBP8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 SMIM3Q9BZL3 60 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 C19orf12Q9NSK7 152 aa8.7□□□□□ -1.02
VIPAS39-203ENST00000448935 IGSF23A1L1A6 192 aa8.69□□□□□ -1.02
VIPAS39-203ENST00000448935 MARCH11A6NNE9 402 aa8.69□□□□□ -1.02
VIPAS39-203ENST00000448935 GOSR1O95249 250 aa8.69□□□□□ -1.02
VIPAS39-203ENST00000448935 RAB5CP51148 216 aa8.69□□□□□ -1.02
VIPAS39-203ENST00000448935 BRWD1-AS2P59051 145 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms