RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 F8VWA3 439 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 AIPO00170 330 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 CCL24O00175 119 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 SLC22A1O15245 554 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 AREGP15514 252 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 CCL3L1P16619 93 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 CD36P16671 472 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 RAB4AP20338 218 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 FUT3P21217 361 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 GADD45AP24522 165 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 FGF9P31371 208 aaPredicted RBP5.49□□□□□ -1.53
HDAC9-216ENST00000446646 OR3A1P47881 315 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 PAX5Q02548 391 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 ARL6IP1Q15041 203 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 SSX1Q16384 188 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 TMEM30BQ3MIR4 351 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 PIGYQ3MUY2 71 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 ZNF260Q3ZCT1 412 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 C1orf100Q5SVJ3 147 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 C6orf183Q5T699 404 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 FAM27D1Q5T7N8 215 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 C22orf42Q6IC83 251 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 TMEM91Q6ZNR0 172 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 LRRTM1Q86UE6 522 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 CROCCP3Q8IVE0 287 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 NHLRC2Q8NBF2 726 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 OR51D1Q8NGF3 324 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 FAM46BQ96A09 425 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 CREB3L1Q96BA8 519 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 SAT2Q96F10 170 aaPredicted RBP5.49□□□□□ -1.53
HDAC9-216ENST00000446646 NOL4LQ96MY1 436 aaPredicted RBP5.49□□□□□ -1.53
HDAC9-216ENST00000446646 MRPS26Q9BYN8 205 aaKnown RBP5.49□□□□□ -1.53
HDAC9-216ENST00000446646 KRTAP4-11Q9BYQ6 195 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 FAM212BQ9NTI7 297 aaPredicted RBP5.49□□□□□ -1.53
HDAC9-216ENST00000446646 LINC00527Q9UJ94 153 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 MGAT4AQ9UM21 535 aa5.49□□□□□ -1.53
HDAC9-216ENST00000446646 AK6Q9Y3D8 172 aaKnown RBP5.49□□□□□ -1.53
HDAC9-216ENST00000446646 HMCN2Q8NDA2 5059 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 METTL21EPA6NDL7 271 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 ZNF701M0R085 212 aaPredicted RBP5.48□□□□□ -1.53
HDAC9-216ENST00000446646 GEMIN2O14893 280 aaKnown RBP5.48□□□□□ -1.53
HDAC9-216ENST00000446646 SPINT2O43291 252 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 AIREO43918 545 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 PDCD6O75340 191 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 M6PRP20645 277 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 RAB4BP61018 213 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 RPS27AP62979 156 aaKnown RBP5.48□□□□□ -1.53
HDAC9-216ENST00000446646 ZNF273Q14593 569 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 INSL4Q14641 139 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 C9orf66Q5T8R8 295 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 LCE5AQ5TCM9 118 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 SIGIRRQ6IA17 410 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 Q6P435 159 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 FAM122CQ6P4D5 195 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 MOB1BQ7L9L4 216 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 RTN4RL2Q86UN3 420 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 SUMF2Q8NBJ7 301 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 OR56B1Q8NGI3 324 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 ZNF596Q8TC21 504 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 LRRC20Q8TCA0 184 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 NABP2Q9BQ15 211 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 RIMS4Q9H426 269 aaPredicted RBP5.48□□□□□ -1.53
HDAC9-216ENST00000446646 BANF2Q9H503 90 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 CHMP1AQ9HD42 196 aaPredicted RBP5.48□□□□□ -1.53
HDAC9-216ENST00000446646 ABCB10Q9NRK6 738 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 PLEKHJ1Q9NW61 149 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 TXNL4BQ9NX01 149 aaKnown RBP5.48□□□□□ -1.53
HDAC9-216ENST00000446646 ING3Q9NXR8 418 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 KCNIP1Q9NZI2 227 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 TRAPPC2LQ9UL33 140 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 AMMECR1Q9Y4X0 333 aaPredicted RBP5.48□□□□□ -1.53
HDAC9-216ENST00000446646 HILPDAQ9Y5L2 63 aa5.48□□□□□ -1.53
HDAC9-216ENST00000446646 TRAV24A0A0B4J272 114 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 PSMB11A5LHX3 300 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 IFITM5A6NNB3 132 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 C17orf98A8MV24 154 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 ODF3BA8MYP8 253 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 TOR1AO14656 332 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 ARG1P05089 322 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 STAG3L2P0CL84 134 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 IGHV1-8P0DP01 117 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 SPNP16150 400 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 GZMHP20718 246 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 IL3RAP26951 378 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 CEACAM3P40198 252 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 RPS16P62249 146 aaKnown RBP5.47□□□□□ -1.53
HDAC9-216ENST00000446646 AESQ08117 197 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 P2RY14Q15391 338 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 HEPN1Q6WQI6 88 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 GPR141Q7Z602 305 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 ZNF554Q86TJ5 538 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 TPRX1Q8N7U7 411 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 OR10A7Q8NGE5 316 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 NDNFQ8TB73 568 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 RAB24Q969Q5 203 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 PTX4Q96A99 478 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 FAM3DQ96BQ1 224 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 FAM110AQ9BQ89 295 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 TM2D1Q9BX74 207 aa5.47□□□□□ -1.53
HDAC9-216ENST00000446646 CLEC7AQ9BXN2 247 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms