RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 C11orf87Q6NUJ2 197 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 Q8TCH9 128 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 FAM222BQ8WU58 562 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 SAP30LQ9HAJ7 183 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 WIPI2Q9Y4P8 454 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 RELNP78509 3460 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-201ENST00000442201 SDCBPO00560 298 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-201ENST00000442201 LHBP01229 141 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 AKR1C3P42330 323 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 CEBPDP49716 269 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-201ENST00000442201 FGF8P55075 233 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-201ENST00000442201 SRSF7Q16629 238 aaKnown RBP eCLIP6.77□□□□□ -1.33
CCDC39-201ENST00000442201 GGNBP1Q5YKI7 109 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 SSX7Q7RTT5 188 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 KIRREL1Q96J84 757 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 NECAP2Q9NVZ3 263 aa6.77□□□□□ -1.33
CCDC39-201ENST00000442201 AURKAIP1Q9NWT8 199 aaPredicted RBP6.77□□□□□ -1.33
CCDC39-201ENST00000442201 KIR2DS1A0A191URI9 304 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 LRRC30A6NM36 301 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 PSG2P11465 335 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 PRDX2P32119 198 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 KIR2DS4P43632 304 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 KIR2DS1Q14954 304 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 BTNL8Q6UX41 500 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 Q6ZS49 121 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 OR52B4Q8NGK2 314 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 ORAOV1Q8WV07 137 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 Q9N2K0 584 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 CBLN4Q9NTU7 201 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 RNF24Q9Y225 148 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 SPTBN1Q01082 2364 aaKnown RBP6.76□□□□□ -1.33
CCDC39-201ENST00000442201 ICE1Q9Y2F5 2266 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 TRBV6-6A0A0A6YYG2 114 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 CCL25O15444 150 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 PSPNO60542 156 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 CYB5R3P00387 301 aaPredicted RBP6.76□□□□□ -1.33
CCDC39-201ENST00000442201 OR5H8P0DN80 308 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 TPT1P13693 172 aaKnown RBP6.76□□□□□ -1.33
CCDC39-201ENST00000442201 SLC35E3Q7Z769 313 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 MRPL30Q8TCC3 161 aaKnown RBP6.76□□□□□ -1.33
CCDC39-201ENST00000442201 CCDC107Q8WV48 283 aa6.76□□□□□ -1.33
CCDC39-201ENST00000442201 C1QL1O75973 258 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 TOMM40O96008 361 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 RBMXP38159 391 aaKnown RBP6.75□□□□□ -1.33
CCDC39-201ENST00000442201 ARF6P62330 175 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 COL10A1Q03692 680 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 ATXN7L3Q14CW9 347 aaPredicted RBP6.75□□□□□ -1.33
CCDC39-201ENST00000442201 ZNF497Q6ZNH5 498 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 Q6ZPA2 131 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 TMED4Q7Z7H5 227 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 C1orf87Q8N0U7 546 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 MUC20Q8N307 709 aaPredicted RBP6.75□□□□□ -1.33
CCDC39-201ENST00000442201 ZDHHC22Q8N966 263 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 OR8U1Q8NH10 309 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 PPP1R35Q8TAP8 253 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 PLPPR1Q8TBJ4 325 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 SCRT1Q9BWW7 348 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 LOC105371242A0A075B767 164 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 IGHV3OR15-7A0A075B7D8 119 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 C19orf84I3L1E1 186 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 IFNA21P01568 189 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 TK1P04183 234 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 SNRNP70P08621 437 aaKnown RBP6.75□□□□□ -1.33
CCDC39-201ENST00000442201 CD80P33681 288 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 GABRA2P47869 451 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 TMEM241Q24JQ0 296 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 MOB1BQ7L9L4 216 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 CD177Q8N6Q3 437 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 SCGB3A2Q96PL1 93 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 TRAPPC2LQ9UL33 140 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 IGKV1D-17A0A075B6S4 117 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 TMEM30CPA0ZSE6 113 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 DFFBO76075 338 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 IGFBP2P18065 325 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 CDC34P49427 236 aaPredicted RBP6.75□□□□□ -1.33
CCDC39-201ENST00000442201 RPS20P60866 119 aaKnown RBP6.75□□□□□ -1.33
CCDC39-201ENST00000442201 FAM201AQ5SY85 155 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 C20orf204Q6ZNR8 217 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 LHFPL1Q86WI0 220 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 GAPTQ8N292 157 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 MARCH1Q8TCQ1 289 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 MRGPRFQ96AM1 343 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 AKR1E2Q96JD6 320 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 RNF2Q99496 336 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 CYTL1Q9NRR1 136 aa6.75□□□□□ -1.33
CCDC39-201ENST00000442201 TEX13DA0A0J9YY54 714 aaPredicted RBP6.74□□□□□ -1.33
CCDC39-201ENST00000442201 A0A1W2PPE2 198 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 C20orf202A1L168 122 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 OR5H14A6NHG9 310 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 TFF1P04155 84 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 RPS10P46783 165 aaKnown RBP6.74□□□□□ -1.33
CCDC39-201ENST00000442201 NPY4RP50391 375 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 COA6Q5JTJ3 125 aaKnown RBP6.74□□□□□ -1.33
CCDC39-201ENST00000442201 SLC35E4Q6ICL7 350 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 ZNF880Q6PDB4 577 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 LYG1Q8N1E2 194 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 DEFB108BQ8NET1 73 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 CCL17Q92583 94 aa6.74□□□□□ -1.33
CCDC39-201ENST00000442201 ALKBH7Q9BT30 221 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 526.6 ms