RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 NHLH1Q02575 133 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 ZNF816Q0VGE8 651 aaPredicted RBP6.4□□□□□ -1.38
HDAC9-214ENST00000441542 HLA-DRB5Q30154 266 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 LINC01551Q86U37 167 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 OR8I2Q8N0Y5 310 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 ZNF611Q8N823 705 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 MBD3L1Q8WWY6 194 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 PP6455Q8WZ26 134 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 NAA38Q9BRA0 125 aaKnown RBP6.4□□□□□ -1.38
HDAC9-214ENST00000441542 NRN1Q9NPD7 142 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 ALKBH4Q9NXW9 302 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 MAP1BP46821 2468 aaKnown RBP6.4□□□□□ -1.38
HDAC9-214ENST00000441542 TLX3O43711 291 aaPredicted RBP6.4□□□□□ -1.38
HDAC9-214ENST00000441542 B4GALT1P15291 398 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 IGLV3-21P80748 117 aaPredicted RBP6.4□□□□□ -1.38
HDAC9-214ENST00000441542 MRPL52Q86TS9 123 aaKnown RBP6.4□□□□□ -1.38
HDAC9-214ENST00000441542 TDHQ8IZJ6 230 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 ZNF295-AS1Q8N0V1 137 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 GJC3Q8NFK1 279 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 BCL2L2Q92843 193 aaPredicted RBP6.4□□□□□ -1.38
HDAC9-214ENST00000441542 PLPPR2Q96GM1 343 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 RCHY1Q96PM5 261 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 MCRIP2Q9BUT9 160 aaKnown RBP6.4□□□□□ -1.38
HDAC9-214ENST00000441542 GNB4Q9HAV0 340 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 ELOVL5Q9NYP7 299 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 OR1A1Q9P1Q5 309 aa6.4□□□□□ -1.38
HDAC9-214ENST00000441542 TRAV1-1A0A0B4J248 108 aa6.4□□□□□ -1.39
HDAC9-214ENST00000441542 IGKV3-11P04433 115 aa6.4□□□□□ -1.39
HDAC9-214ENST00000441542 SLC25A6P12236 298 aa6.4□□□□□ -1.39
HDAC9-214ENST00000441542 BCL3P20749 454 aa6.4□□□□□ -1.39
HDAC9-214ENST00000441542 CTSSP25774 331 aa6.4□□□□□ -1.39
HDAC9-214ENST00000441542 RPL19P84098 196 aaKnown RBP6.4□□□□□ -1.39
HDAC9-214ENST00000441542 ZP4Q12836 540 aa6.4□□□□□ -1.39
HDAC9-214ENST00000441542 LRRC75BQ2VPJ9 315 aa6.4□□□□□ -1.39
HDAC9-214ENST00000441542 TMEM108Q6UXF1 575 aa6.4□□□□□ -1.39
HDAC9-214ENST00000441542 ZNF439Q8NDP4 499 aa6.4□□□□□ -1.39
HDAC9-214ENST00000441542 OR10G3Q8NGC4 313 aa6.4□□□□□ -1.39
HDAC9-214ENST00000441542 OR10G8Q8NGN5 311 aa6.4□□□□□ -1.39
HDAC9-214ENST00000441542 FGF14Q92915 247 aa6.4□□□□□ -1.39
HDAC9-214ENST00000441542 MRPL13Q9BYD1 178 aaKnown RBP6.4□□□□□ -1.39
HDAC9-214ENST00000441542 ULBP2Q9BZM5 246 aa6.4□□□□□ -1.39
HDAC9-214ENST00000441542 WASHC3Q9Y3C0 194 aa6.4□□□□□ -1.39
HDAC9-214ENST00000441542 WDFY3Q8IZQ1 3526 aa6.4□□□□□ -1.39
HDAC9-214ENST00000441542 OBSL1O75147 1896 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 SCO2A0A1W2PP80 73 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 A0A1W2PPV4 95 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 ZNF891A8MT65 544 aaPredicted RBP6.39□□□□□ -1.39
HDAC9-214ENST00000441542 NPIPA3F8WFD2 350 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 SNAI2O43623 268 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 GLB1P16278 677 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 FBLP22087 321 aaKnown RBP6.39□□□□□ -1.39
HDAC9-214ENST00000441542 S100GP29377 79 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 DEFB133Q30KQ1 61 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 SLC25A47Q6Q0C1 308 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 SLC22A18ASQ8N1D0 253 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 OR4B1Q8NGF8 309 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 LMX1AQ8TE12 382 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 GLMPQ8WWB7 406 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 SPTSSAQ969W0 71 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 ZDHHC16Q969W1 377 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 SFRP2Q96HF1 295 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 TMEM56Q96MV1 263 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 RAB40CQ96S21 281 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 LRFN3Q9BTN0 628 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 COX11Q9Y6N1 276 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 TMEM56-RWDD3S4R434 201 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 CLDN14O95500 239 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 WNT2P09544 360 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 IGLC2P0DOY2 106 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 IGLC3P0DOY3 106 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 F2RP25116 425 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 NTSR1P30989 418 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 SCGB2A2Q13296 93 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 FAM53AQ6NSI3 398 aaPredicted RBP6.39□□□□□ -1.39
HDAC9-214ENST00000441542 DEFB123Q8N688 67 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 STPG3Q8N7X2 389 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 CORO2AQ92828 525 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 BORCS7Q96B45 105 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 CRIM1Q9NZV1 1036 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 CLCF1Q9UBD9 225 aa6.39□□□□□ -1.39
HDAC9-214ENST00000441542 CTXND1A0A1B0GTU2 59 aa6.38□□□□□ -1.39
HDAC9-214ENST00000441542 OR2T8A6NH00 312 aa6.38□□□□□ -1.39
HDAC9-214ENST00000441542 C3orf79P0CE67 100 aa6.38□□□□□ -1.39
HDAC9-214ENST00000441542 UCP1P25874 307 aa6.38□□□□□ -1.39
HDAC9-214ENST00000441542 SRIP30626 198 aa6.38□□□□□ -1.39
HDAC9-214ENST00000441542 GPM6AP51674 278 aa6.38□□□□□ -1.39
HDAC9-214ENST00000441542 GFRA1P56159 465 aa6.38□□□□□ -1.39
HDAC9-214ENST00000441542 RSPO1Q2MKA7 263 aaPredicted RBP6.38□□□□□ -1.39
HDAC9-214ENST00000441542 PLPPR5Q32ZL2 321 aa6.38□□□□□ -1.39
HDAC9-214ENST00000441542 RAET1LQ5VY80 246 aa6.38□□□□□ -1.39
HDAC9-214ENST00000441542 TMEM92Q6UXU6 159 aa6.38□□□□□ -1.39
HDAC9-214ENST00000441542 C1orf174Q8IYL3 243 aa6.38□□□□□ -1.39
HDAC9-214ENST00000441542 SSC4DQ8WTU2 575 aa6.38□□□□□ -1.39
HDAC9-214ENST00000441542 APOBEC3DQ96AK3 386 aaPredicted RBP6.38□□□□□ -1.39
HDAC9-214ENST00000441542 PINX1Q96BK5 328 aaKnown RBP6.38□□□□□ -1.39
HDAC9-214ENST00000441542 NUDT11Q96G61 164 aa6.38□□□□□ -1.39
HDAC9-214ENST00000441542 NGBQ9NPG2 151 aa6.38□□□□□ -1.39
HDAC9-214ENST00000441542 DEPPQ9NTK1 212 aa6.38□□□□□ -1.39
HDAC9-214ENST00000441542 ARL2-SNX15V9GYD0 113 aa6.38□□□□□ -1.39
HDAC9-214ENST00000441542 IGKV1-6A0A0C4DH72 117 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms