RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 SOX21Q9Y651 276 aaPredicted RBP5.8□□□□□ -1.48
USP46-201ENST00000441222 ARID2Q68CP9 1835 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 SBF1O95248 1867 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 LIPFP07098 398 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 MYF5P13349 255 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 MPV17P39210 176 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 PGFP49763 221 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 IGSF11Q5DX21 431 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 SAXO1Q8IYX7 474 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 C10orf126Q8N4M7 172 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 MRPL24Q96A35 216 aaKnown RBP5.8□□□□□ -1.48
USP46-201ENST00000441222 QTRT1Q9BXR0 403 aaKnown RBP5.8□□□□□ -1.48
USP46-201ENST00000441222 SLC6A13Q9NSD5 602 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 SERGEFQ9UGK8 458 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 A0A1B0GV72 72 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 LINC01565O15544 149 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 CT62P0C5K7 136 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 CA7P43166 264 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 MEF2CQ06413 473 aaPredicted RBP5.8□□□□□ -1.48
USP46-201ENST00000441222 FAM159AQ6UWV7 190 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 GPR82Q96P67 336 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 AICDAQ9GZX7 198 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 XIRP1Q702N8 1843 aaKnown RBP5.8□□□□□ -1.48
USP46-201ENST00000441222 GVINP1Q7Z2Y8 2422 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 STRCP1A6NGW2 1772 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 PRR33A8MZF0 331 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 PEX11BO96011 259 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 TYMSP04818 313 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 PATE4P0C8F1 98 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 PTGDSP41222 190 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 MVDP53602 400 aa5.8□□□□□ -1.48
USP46-201ENST00000441222 ADAD2Q8NCV1 583 aaKnown RBP5.8□□□□□ -1.48
USP46-201ENST00000441222 METTL1Q9UBP6 276 aaKnown RBP5.8□□□□□ -1.48
USP46-201ENST00000441222 IGHV5-10-1A0A0J9YXX1 117 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 hCG_38984A0A1B0GV85 526 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 H3BRM9 83 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 ATP5LO75964 103 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 NGFRP08138 427 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 SOD3P08294 240 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 CXCL3P19876 107 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 FSTP19883 344 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 NPBWR2P48146 333 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 TMPRSS3P57727 454 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 INSL4Q14641 139 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 CYB561D1Q8N8Q1 229 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 MBD3L1Q8WWY6 194 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 EEF1AKMT3Q96AZ1 226 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 NUDT11Q96G61 164 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 TRAF4Q9BUZ4 470 aaPredicted RBP5.79□□□□□ -1.48
USP46-201ENST00000441222 MRPS18AQ9NVS2 196 aaKnown RBP5.79□□□□□ -1.48
USP46-201ENST00000441222 A0A1B0GTH9 108 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 SLC25A20O43772 301 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 GDF9O60383 454 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 ASAH2BP0C7U1 165 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 SMIM13P0DJ93 91 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 UCP2P55851 309 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 SUMO2P61956 95 aaKnown RBP5.79□□□□□ -1.48
USP46-201ENST00000441222 FSCN3Q9NQT6 498 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 TREM2Q9NZC2 230 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 SIPA1L3O60292 1781 aaPredicted RBP5.79□□□□□ -1.48
USP46-201ENST00000441222 TCRBV16S1A1N1A0A5B0 115 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 NDUFB4O95168 129 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 GPX1P07203 203 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 C8orf88P0DMB2 117 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 CACNG7P62955 275 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 LILRA6Q6PI73 481 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 VN1R4Q7Z5H5 301 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 ZCCHC14Q8WYQ9 949 aaKnown RBP5.79□□□□□ -1.48
USP46-201ENST00000441222 ALG14Q96F25 216 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 AQP10Q96PS8 301 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 WNT5BQ9H1J7 359 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 C1QTNF9BB2RNN3 333 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 ISG15P05161 165 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 PSG6Q00889 435 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 ATP5G2Q06055 141 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 TMEM177Q53S58 311 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 OVCH2Q7RTZ1 564 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 FAM169BQ8N8A8 192 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 OR1P1Q8NH06 330 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 HSF4Q9ULV5 492 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 TRPM3Q9HCF6 1732 aaPredicted RBP5.79□□□□□ -1.48
USP46-201ENST00000441222 FCGR3AP08637 254 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 UNQ9370/PRO34162Q6UXP9 181 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 PRSS27Q9BQR3 290 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 PARD6GQ9BYG4 376 aaPredicted RBP5.79□□□□□ -1.48
USP46-201ENST00000441222 MRPL18Q9H0U6 180 aaKnown RBP5.79□□□□□ -1.48
USP46-201ENST00000441222 TMEM30AQ9NV96 361 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 PGPA6NDG6 321 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 PRSS23O95084 383 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 DRD3P35462 400 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 HIKESHIQ53FT3 197 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 CXorf66Q5JRM2 361 aaPredicted RBP5.79□□□□□ -1.48
USP46-201ENST00000441222 TAF15Q92804 592 aaKnown RBP eCLIP5.79□□□□□ -1.48
USP46-201ENST00000441222 PKIBQ9C010 78 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 NCOR1O75376 2440 aa5.79□□□□□ -1.48
USP46-201ENST00000441222 NPPCP23582 126 aa5.78□□□□□ -1.48
USP46-201ENST00000441222 FCGR2BP31994 310 aaPredicted RBP5.78□□□□□ -1.48
USP46-201ENST00000441222 CBLN2Q8IUK8 224 aa5.78□□□□□ -1.48
USP46-201ENST00000441222 C10orf111Q8N326 155 aa5.78□□□□□ -1.48
USP46-201ENST00000441222 OR11H7Q8NGC8 314 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms