RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 LRP11Q86VZ4 500 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 TAAR3PQ9P1P4 343 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 ERRFI1Q9UJM3 462 aaPredicted RBP11.9□□□□□ -0.5
LIMD1-202ENST00000440097 CACNA1DQ01668 2161 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 PKD1L2Q7Z442 2459 aa11.9□□□□□ -0.5
LIMD1-202ENST00000440097 CST7O76096 145 aa11.9□□□□□ -0.51
LIMD1-202ENST00000440097 TFF1P04155 84 aa11.9□□□□□ -0.51
LIMD1-202ENST00000440097 GZMBP10144 247 aa11.9□□□□□ -0.51
LIMD1-202ENST00000440097 KITLGP21583 273 aa11.9□□□□□ -0.51
LIMD1-202ENST00000440097 MDH2P40926 338 aaKnown RBP11.9□□□□□ -0.51
LIMD1-202ENST00000440097 DYNLT3P51808 116 aa11.9□□□□□ -0.51
LIMD1-202ENST00000440097 SRSF7Q16629 238 aaKnown RBP eCLIP11.9□□□□□ -0.51
LIMD1-202ENST00000440097 DOLPP1Q86YN1 238 aa11.9□□□□□ -0.51
LIMD1-202ENST00000440097 RCC1LQ96I51 464 aaKnown RBP11.9□□□□□ -0.51
LIMD1-202ENST00000440097 K7ENP7 123 aa11.89□□□□□ -0.51
LIMD1-202ENST00000440097 FGF7P21781 194 aa11.89□□□□□ -0.51
LIMD1-202ENST00000440097 TUBG1P23258 451 aa11.89□□□□□ -0.51
LIMD1-202ENST00000440097 CASP6P55212 293 aa11.89□□□□□ -0.51
LIMD1-202ENST00000440097 JOSD1Q15040 202 aaPredicted RBP11.89□□□□□ -0.51
LIMD1-202ENST00000440097 ZNF146Q15072 292 aa11.89□□□□□ -0.51
LIMD1-202ENST00000440097 ZNF695Q8IW36 515 aa11.89□□□□□ -0.51
LIMD1-202ENST00000440097 ZNF664Q8N3J9 261 aa11.89□□□□□ -0.51
LIMD1-202ENST00000440097 TMEM252Q8N6L7 170 aa11.89□□□□□ -0.51
LIMD1-202ENST00000440097 TMEM217Q8N7C4 229 aa11.89□□□□□ -0.51
LIMD1-202ENST00000440097 PLEKHF2Q9H8W4 249 aa11.89□□□□□ -0.51
LIMD1-202ENST00000440097 TUBG2Q9NRH3 451 aa11.89□□□□□ -0.51
LIMD1-202ENST00000440097 OR1A1Q9P1Q5 309 aa11.89□□□□□ -0.51
LIMD1-202ENST00000440097 PITPNC1Q9UKF7 332 aa11.89□□□□□ -0.51
LIMD1-202ENST00000440097 B4DEV8 164 aa11.89□□□□□ -0.51
LIMD1-202ENST00000440097 S100GP29377 79 aa11.89□□□□□ -0.51
LIMD1-202ENST00000440097 NKX2-1P43699 371 aaPredicted RBP11.89□□□□□ -0.51
LIMD1-202ENST00000440097 RAB11AP62491 216 aa11.89□□□□□ -0.51
LIMD1-202ENST00000440097 PRR30Q53SZ7 412 aaPredicted RBP11.89□□□□□ -0.51
LIMD1-202ENST00000440097 MBNL2Q5VZF2 373 aaKnown RBP11.89□□□□□ -0.51
LIMD1-202ENST00000440097 WDR82Q6UXN9 313 aa11.89□□□□□ -0.51
LIMD1-202ENST00000440097 RBMXL1Q96E39 390 aaKnown RBP11.89□□□□□ -0.51
LIMD1-202ENST00000440097 PLCE1Q9P212 2302 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 CLDN34H7C241 214 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 CEACAM8P31997 349 aaPredicted RBP11.88□□□□□ -0.51
LIMD1-202ENST00000440097 RND2P52198 227 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 FAM185AQ8N0U4 392 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 Q8NA96 180 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 GNG13Q9P2W3 67 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 KCNS2Q9ULS6 477 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 OR2W1Q9Y3N9 320 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 LOC102723971A0A1B0GUV8 181 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 A8MXE2 369 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 DVL1O14640 695 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 PSPNO60542 156 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 GABRA2P47869 451 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 KLF3P57682 345 aaPredicted RBP11.88□□□□□ -0.51
LIMD1-202ENST00000440097 FAM90A2PQ658T7 463 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 ZNF880Q6PDB4 577 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 PCSK4Q6UW60 755 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 ZNF497Q6ZNH5 498 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 ODF3L1Q8IXM7 274 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 TMEM183AQ8IXX5 376 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 OR51H1Q8NH63 302 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 CA5BP1Q8WTZ4 195 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 SNRNP40Q96DI7 357 aaKnown RBP11.88□□□□□ -0.51
LIMD1-202ENST00000440097 NDUFAF3Q9BU61 184 aa11.88□□□□□ -0.51
LIMD1-202ENST00000440097 LYRM2Q9NU23 88 aaPredicted RBP11.88□□□□□ -0.51
LIMD1-202ENST00000440097 SPRY3O43610 288 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 AMBPP02760 352 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 CEACAM6P40199 344 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 VAMP2P63027 116 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 TLE4Q04727 773 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 AESQ08117 197 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 CXorf66Q5JRM2 361 aaPredicted RBP11.87□□□□□ -0.51
LIMD1-202ENST00000440097 C11orf53Q8IXP5 236 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 C1orf174Q8IYL3 243 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 LRRC29Q8WV35 223 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 GNPNAT1Q96EK6 184 aaPredicted RBP11.87□□□□□ -0.51
LIMD1-202ENST00000440097 MRPL37Q9BZE1 423 aaKnown RBP11.87□□□□□ -0.51
LIMD1-202ENST00000440097 KCNIP1Q9NZI2 227 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 A0A0G2JNJ9 132 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 A0A1B0GU03 582 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 TGOLN2O43493 480 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 NXPH3O95157 252 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 CYB5R3P00387 301 aaPredicted RBP11.87□□□□□ -0.51
LIMD1-202ENST00000440097 NUTF2P61970 127 aaKnown RBP11.87□□□□□ -0.51
LIMD1-202ENST00000440097 SMIM21Q3B7S5 101 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 ZNF324BQ6AW86 544 aaPredicted RBP11.87□□□□□ -0.51
LIMD1-202ENST00000440097 ACP7Q6ZNF0 438 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 MOB1BQ7L9L4 216 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 FAM169BQ8N8A8 192 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 OR4X1Q8NH49 305 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 NOL4LQ96MY1 436 aaPredicted RBP11.87□□□□□ -0.51
LIMD1-202ENST00000440097 TMEM222Q9H0R3 208 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 Q9UFV3 132 aa11.87□□□□□ -0.51
LIMD1-202ENST00000440097 DIDO1Q9BTC0 2240 aaKnown RBP11.86□□□□□ -0.51
LIMD1-202ENST00000440097 TRBV6-6A0A0A6YYG2 114 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 EREGO14944 169 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 TUSC2O75896 110 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 CDS2O95674 445 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 HBE1P02100 147 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 ZNF16P17020 682 aaPredicted RBP11.86□□□□□ -0.51
LIMD1-202ENST00000440097 RAB4BP61018 213 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 MZT1Q08AG7 82 aa11.86□□□□□ -0.51
LIMD1-202ENST00000440097 MSMPQ1L6U9 139 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms