RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 COL10A1Q03692 680 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 GAMTQ14353 236 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 HIST3H3Q16695 136 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 CDCP2Q5VXM1 449 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 ACSM6Q6P461 480 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 HEPN1Q6WQI6 88 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 CYP2G1PQ6ZSU1 146 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 TPPP3Q9BW30 176 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 SEMA5BQ9P283 1151 aa5.7□□□□□ -1.5
CSDE1-205ENST00000438362 ZNF716A6NP11 495 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 PROB1E7EW31 1015 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 H0Y8G0 127 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 S1PR2O95136 353 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 TNFRSF1AP19438 455 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 PRDX2P32119 198 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 OTX1P32242 354 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-205ENST00000438362 CEBPDP49716 269 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-205ENST00000438362 HES3Q5TGS1 186 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 STUMQ69YW2 141 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 ABLIM2Q6H8Q1 611 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 ZNF525Q8N782 197 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 OR5AU1Q8NGC0 362 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 WBP1Q96G27 269 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 PXMP4Q9Y6I8 212 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 LRRK1Q38SD2 2015 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 COL4A3Q01955 1670 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 HELTA6NFD8 242 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 SNURFLB1AK76 121 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 RHBDL1O75783 438 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 CNIH1O95406 144 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 IER3P46695 156 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 TCL1AP56279 114 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 HLA-DRB5Q30154 266 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 WFDC8Q8IUA0 241 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 TMEM204Q9BSN7 226 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 SDF2L1Q9HCN8 221 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 ZNF835Q9Y2P0 537 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 TIMM9Q9Y5J7 89 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 DOCK7Q96N67 2140 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 TRAV38-1A0A0B4J264 116 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 hADV38S2A0JD32 116 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 MARCH11A6NNE9 402 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 C9JQL5 133 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 OPRK1P41145 380 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 UBE2L3P68036 154 aaKnown RBP5.69□□□□□ -1.5
CSDE1-205ENST00000438362 TNFAIP6P98066 277 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-205ENST00000438362 MOGAT3Q86VF5 341 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 TMEM183AQ8IXX5 376 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 DEFB123Q8N688 67 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 SLC24A4Q8NFF2 622 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 OR1L6Q8NGR2 347 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 TBX15Q96SF7 602 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 ANAPC10Q9UM13 185 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 WIPI2Q9Y4P8 454 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 KIAA2026Q5HYC2 2103 aa5.69□□□□□ -1.5
CSDE1-205ENST00000438362 PRRG2O14669 202 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 MGST3O14880 152 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 ELOBQ15370 118 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 VMA21Q3ZAQ7 101 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 FGFBP3Q8TAT2 258 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 GTF3AQ92664 365 aaKnown RBP5.68□□□□□ -1.5
CSDE1-205ENST00000438362 PRNDQ9UKY0 176 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 SHANK1Q9Y566 2161 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 WIPF3A6NGB9 483 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 HIST1H2BKO60814 126 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 HIST1H2BJP06899 126 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 HIST1H2BOP23527 126 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 HIST1H2BBP33778 126 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 HIST1H2BDP58876 126 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 HIST1H2BCP62807 126 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 GNB1P62873 340 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 RBPJQ06330 500 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 HIST2H2BEQ16778 126 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-205ENST00000438362 FAM214BQ7L5A3 538 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 REC114Q7Z4M0 266 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 HIST1H2BHQ93079 126 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 HIST1H2BNQ99877 126 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 HIST1H2BMQ99879 126 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 ZNF703Q9H7S9 590 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-205ENST00000438362 EP300Q09472 2414 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-205ENST00000438362 GPR179Q6PRD1 2367 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 A0A1B0GW64 132 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 ODAMA1E959 279 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 ZNF891A8MT65 544 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-205ENST00000438362 J3QW42 95 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 M0QZK8 103 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 GGCTO75223 188 aaKnown RBP5.68□□□□□ -1.5
CSDE1-205ENST00000438362 VENTXO95231 258 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 CELA3AP09093 270 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 CT45A10P0DMU9 189 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 MIC13Q5XKP0 118 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 DDA1Q9BW61 102 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 PAM16Q9Y3D7 125 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 KIAA1671Q9BY89 1806 aa5.68□□□□□ -1.5
CSDE1-205ENST00000438362 TMEM265A0A087WTH1 108 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 E9PLN8 166 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 J3QR06 171 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 ETV2O00321 342 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-205ENST00000438362 KLF7O75840 302 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms