RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 MPV17P39210 176 aa11.43□□□□□ -0.58
COL6A3-207ENST00000433762 RPP30P78346 268 aaKnown RBP11.43□□□□□ -0.58
COL6A3-207ENST00000433762 CR1LQ2VPA4 569 aa11.43□□□□□ -0.58
COL6A3-207ENST00000433762 OR8G2PQ6IF36 304 aa11.43□□□□□ -0.58
COL6A3-207ENST00000433762 IGFL2Q6UWQ7 119 aa11.43□□□□□ -0.58
COL6A3-207ENST00000433762 ZNF709Q8N972 641 aa11.43□□□□□ -0.58
COL6A3-207ENST00000433762 OR52E5Q8NH55 327 aa11.43□□□□□ -0.58
COL6A3-207ENST00000433762 BTF3L4Q96K17 158 aa11.43□□□□□ -0.58
COL6A3-207ENST00000433762 TXNDC17Q9BRA2 123 aa11.43□□□□□ -0.58
COL6A3-207ENST00000433762 NCOR1P1Q9H4R4 102 aa11.43□□□□□ -0.58
COL6A3-207ENST00000433762 PITPNC1Q9UKF7 332 aa11.43□□□□□ -0.58
COL6A3-207ENST00000433762 CHD3Q12873 2000 aaKnown RBP11.43□□□□□ -0.58
COL6A3-207ENST00000433762 SPINT2O43291 252 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 GATCO43716 136 aaKnown RBP11.42□□□□□ -0.58
COL6A3-207ENST00000433762 KRASP01116 189 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 FGF7P21781 194 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 CFHR2P36980 270 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 ELLP55199 621 aaPredicted RBP11.42□□□□□ -0.58
COL6A3-207ENST00000433762 BRWD1-AS2P59051 145 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 OR10A7Q8NGE5 316 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 OR52L2PQ8NGH6 319 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 OR10G9Q8NGN4 311 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 OR10G7Q8NGN6 311 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 LRFN3Q9BTN0 628 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 NPCDR1Q9BY65 106 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 TINAGQ9UJW2 476 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 KIAA2026Q5HYC2 2103 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 C17orf98A8MV24 154 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 PFN1P07737 140 aaKnown RBP11.42□□□□□ -0.58
COL6A3-207ENST00000433762 TRGC1P0CF51 173 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 TCF15Q12870 199 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 BSXQ3C1V8 233 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 ACOT6Q3I5F7 207 aaPredicted RBP11.42□□□□□ -0.58
COL6A3-207ENST00000433762 ZNF718Q3SXZ3 478 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 JPT1Q9UK76 154 aa11.42□□□□□ -0.58
COL6A3-207ENST00000433762 ZNF729A6NN14 1252 aaPredicted RBP11.41□□□□□ -0.58
COL6A3-207ENST00000433762 ITGB1BP1O14713 200 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 LYZL6O75951 148 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 AESQ08117 197 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 PYY3Q5JQD4 70 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 COA6Q5JTJ3 125 aaKnown RBP11.41□□□□□ -0.58
COL6A3-207ENST00000433762 PRSS33Q8NF86 280 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 ABHD5Q8WTS1 349 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 SSX3Q99909 188 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 CHODLQ9H9P2 273 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 GAB2Q9UQC2 676 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 C3orf80F5H4A9 247 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 C15orf65H3BRN8 121 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 CD99P14209 185 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 GZMHP20718 246 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 KIR2DS2P43631 304 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 GABRA2P47869 451 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 ZNF816Q0VGE8 651 aaPredicted RBP11.41□□□□□ -0.58
COL6A3-207ENST00000433762 FFAR4Q5NUL3 377 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 SPNS3Q6ZMD2 512 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 PPP1R35Q8TAP8 253 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 FRZBQ92765 325 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 RAB9BQ9NP90 201 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 PLSCR4Q9NRQ2 329 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 WDR83OSQ9Y284 106 aa11.41□□□□□ -0.58
COL6A3-207ENST00000433762 OR5H1A6NKK0 313 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 TIMM8AO60220 97 aaPredicted RBP11.4□□□□□ -0.58
COL6A3-207ENST00000433762 ZG16O60844 167 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 HPRT1P00492 218 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 SPINK2P20155 84 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 SRP14P37108 136 aaKnown RBP11.4□□□□□ -0.58
COL6A3-207ENST00000433762 TMPRSS3P57727 454 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 RPL23P62829 140 aaKnown RBP11.4□□□□□ -0.58
COL6A3-207ENST00000433762 DHRS13Q6UX07 377 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 UBALD1Q8TB05 177 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 SARAFQ96BY9 339 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 NEIL1Q96FI4 390 aaPredicted RBP11.4□□□□□ -0.58
COL6A3-207ENST00000433762 CLN8Q9UBY8 286 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 USF3Q68DE3 2245 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 MARCH11A6NNE9 402 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 PDE6DO43924 150 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 YPEL1O60688 119 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 GCH1P30793 250 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 KIR2DL2P43627 348 aaPredicted RBP11.4□□□□□ -0.58
COL6A3-207ENST00000433762 CEBPDP49716 269 aaPredicted RBP11.4□□□□□ -0.58
COL6A3-207ENST00000433762 COL10A1Q03692 680 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 P2RY6Q15077 328 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 OR51G1Q8NGK1 321 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 MRGPRDQ8TDS7 321 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 YPEL2Q96QA6 119 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 OR5B12Q96R08 314 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 PARLQ9H300 379 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 KCNIP2Q9NS61 270 aa11.4□□□□□ -0.58
COL6A3-207ENST00000433762 H7BYZ3 331 aa11.39□□□□□ -0.59
COL6A3-207ENST00000433762 HRASP01112 189 aa11.39□□□□□ -0.59
COL6A3-207ENST00000433762 TYMSP04818 313 aa11.39□□□□□ -0.59
COL6A3-207ENST00000433762 HIST1H1BP16401 226 aaKnown RBP11.39□□□□□ -0.59
COL6A3-207ENST00000433762 FAM3BP58499 235 aaPredicted RBP11.39□□□□□ -0.59
COL6A3-207ENST00000433762 SPCS3P61009 180 aa11.39□□□□□ -0.59
COL6A3-207ENST00000433762 C3orf36Q3SXR2 165 aa11.39□□□□□ -0.59
COL6A3-207ENST00000433762 Q6ZR03 302 aa11.39□□□□□ -0.59
COL6A3-207ENST00000433762 ZNF808Q8N4W9 903 aaPredicted RBP11.39□□□□□ -0.59
COL6A3-207ENST00000433762 RNASEH2CQ8TDP1 164 aaKnown RBP11.39□□□□□ -0.59
COL6A3-207ENST00000433762 RAB24Q969Q5 203 aa11.39□□□□□ -0.59
COL6A3-207ENST00000433762 TRIB1Q96RU8 372 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms