RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 CELA3AP09093 270 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 CECR9P0C854 216 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 RTN4RQ9BZR6 473 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 OR5AC2Q9NZP5 309 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 RCC2Q9P258 522 aaKnown RBP9.84□□□□□ -0.83
PTCH1-208ENST00000430669 SMIM17P0DL12 118 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 NAT1P18440 290 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 GFRA1P56159 465 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 TOLLIPQ9H0E2 274 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 ZDHHC11Q9H8X9 412 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 ATP6V0CP27449 155 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 UBE2L3P68036 154 aaKnown RBP9.84□□□□□ -0.83
PTCH1-208ENST00000430669 FGFRL1Q8N441 504 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 MEGF10Q96KG7 1140 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 GGACTQ9BVM4 153 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 RBKSQ9H477 322 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 ROS1P08922 2347 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 PKDREJQ9NTG1 2253 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 GNG7O60262 68 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 B2MP61769 119 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 BSCL2Q96G97 398 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-208ENST00000430669 CCL13Q99616 98 aa9.84□□□□□ -0.83
PTCH1-208ENST00000430669 TPPP2P59282 170 aa9.83□□□□□ -0.84
PTCH1-208ENST00000430669 Q8WTZ3 238 aa9.83□□□□□ -0.84
PTCH1-208ENST00000430669 ASCL3Q9NQ33 180 aa9.83□□□□□ -0.84
PTCH1-208ENST00000430669 MBNL2Q5VZF2 373 aaKnown RBP9.83□□□□□ -0.84
PTCH1-208ENST00000430669 SIGIRRQ6IA17 410 aa9.83□□□□□ -0.84
PTCH1-208ENST00000430669 RCC1P18754 421 aaPredicted RBP9.83□□□□□ -0.84
PTCH1-208ENST00000430669 NHLRC3Q5JS37 347 aa9.83□□□□□ -0.84
PTCH1-208ENST00000430669 ZNF385CQ66K41 422 aaPredicted RBP9.83□□□□□ -0.84
PTCH1-208ENST00000430669 ZNF660Q6AZW8 331 aaPredicted RBP9.83□□□□□ -0.84
PTCH1-208ENST00000430669 MMD2Q8IY49 270 aa9.83□□□□□ -0.84
PTCH1-208ENST00000430669 CD40P25942 277 aa9.83□□□□□ -0.84
PTCH1-208ENST00000430669 FAM89BQ8N5H3 189 aa9.83□□□□□ -0.84
PTCH1-208ENST00000430669 NEU4Q8WWR8 484 aaPredicted RBP9.83□□□□□ -0.84
PTCH1-208ENST00000430669 SPRR3Q9UBC9 169 aa9.83□□□□□ -0.84
PTCH1-208ENST00000430669 TIMP3P35625 211 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 FGF8P55075 233 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-208ENST00000430669 ZNF818PQ6ZRF7 136 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 USF3Q68DE3 2245 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 IGHV1-69-2A0A0G2JMI3 117 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 PSMG3Q9BT73 122 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-208ENST00000430669 COA4Q9NYJ1 87 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 BCL2P10415 239 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 SRP14P37108 136 aaKnown RBP9.82□□□□□ -0.84
PTCH1-208ENST00000430669 NHLH2Q02577 135 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 OR10A7Q8NGE5 316 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 GPR6P46095 362 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-208ENST00000430669 RALYQ9UKM9 306 aaKnown RBP9.82□□□□□ -0.84
PTCH1-208ENST00000430669 E9PQ18 207 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 DLL1O00548 723 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 IGHV3-13P01766 116 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 IGHV3-7P01780 117 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 LIPFP07098 398 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 ZNF497Q6ZNH5 498 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 IGSF23A1L1A6 192 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 DBX1A6NMT0 343 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 PAX5Q02548 391 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 FAM210BQ96KR6 192 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 OR1A1Q9P1Q5 309 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 ETV2O00321 342 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-208ENST00000430669 MUC15Q8N387 334 aa9.82□□□□□ -0.84
PTCH1-208ENST00000430669 HSPB1P04792 205 aaKnown RBP9.81□□□□□ -0.84
PTCH1-208ENST00000430669 ORM2P19652 201 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 LYZP61626 148 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 ZNF439Q8NDP4 499 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 MEF2CQ06413 473 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-208ENST00000430669 FABP9Q0Z7S8 132 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 IQCJQ1A5X6 159 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 TMEM255AQ5JRV8 349 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 OR52M1Q8NGK5 317 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 NABP1Q96AH0 204 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 QTRT1Q9BXR0 403 aaKnown RBP9.81□□□□□ -0.84
PTCH1-208ENST00000430669 DANCRP0C864 163 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 ID4P47928 161 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 FAM78BQ5VT40 261 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 RTN4RL2Q86UN3 420 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 OR4A5Q8NH83 315 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 OR9G1Q8NH87 305 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 LINC00052Q96N35 136 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 HELTA6NFD8 242 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 FAM90A9PA6NNJ1 464 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 ZNF205O95201 554 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 CRYGSP22914 178 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 CACNA1GO43497 2377 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 SHANK1Q9Y566 2161 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 BSXQ3C1V8 233 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 VWA1Q6PCB0 445 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 ZNF826PQ6ZT77 177 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 C2CD4CQ8TF44 421 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 DEPPQ9NTK1 212 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 TMEM140Q9NV12 185 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 ELOA3CA0A087WX78 387 aaPredicted RBP9.81□□□□□ -0.84
PTCH1-208ENST00000430669 CEACAM18A8MTB9 384 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 HIST1H1EP10412 219 aaKnown RBP9.81□□□□□ -0.84
PTCH1-208ENST00000430669 BSPH1Q075Z2 132 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 AWAT1Q58HT5 328 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 C19orf35Q6ZS72 473 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 NHLRC2Q8NBF2 726 aa9.81□□□□□ -0.84
PTCH1-208ENST00000430669 CXorf65A6NEN9 183 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms