RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 LINC00470Q9BZP3 86 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 C5orf66Q9H5L9 145 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 NAA60Q9H7X0 242 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 SLC35D1Q9NTN3 355 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 ELOA3CA0A087WX78 387 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-204ENST00000427724 SS18L1O75177 396 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-204ENST00000427724 PF4P02776 101 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 FHL1Q13642 323 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 Q56UQ5 140 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 NCR3LG1Q68D85 454 aa9.08□□□□□ -0.96
TCOF1-204ENST00000427724 CENPVQ7Z7K6 275 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-204ENST00000427724 WDFY4Q6ZS81 3184 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 C17orf100A8MU93 164 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 RNF223E7ERA6 249 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 CD8AP01732 235 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 CT45A6P0DMU7 189 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 CT45A5P0DMU8 189 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 CT45A7P0DMV0 189 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 ACKR3P25106 362 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 CD200P41217 278 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 CEBPDP49716 269 aaPredicted RBP9.07□□□□□ -0.96
TCOF1-204ENST00000427724 CT45A1Q5HYN5 189 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 OR4A4PQ8NGN8 299 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 CT45A3Q8NHU0 189 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 PHF3Q92576 2039 aaKnown RBP9.07□□□□□ -0.96
TCOF1-204ENST00000427724 PLXNA2O75051 1894 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 MUC3AQ02505 3323 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 THBDP07204 575 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 C11orf44Q8N8P7 122 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 C5orf52A6NGY3 159 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 IFNL4K9M1U5 179 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 LIPFP07098 398 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 CTSDP07339 412 aaPredicted RBP9.07□□□□□ -0.96
TCOF1-204ENST00000427724 RAB7AP51149 207 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 P2RY4P51582 365 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 HLA-DRB3P79483 266 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 IL22RA2Q969J5 263 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 TMEM45BQ96B21 275 aa9.07□□□□□ -0.96
TCOF1-204ENST00000427724 GNPNAT1Q96EK6 184 aaPredicted RBP9.07□□□□□ -0.96
TCOF1-204ENST00000427724 SPEGQ15772 3267 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 H0YL77 283 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 HRASP01112 189 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 OR5G3P0C626 314 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 HTD2P86397 168 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 VAX1Q5SQQ9 334 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 ZNF880Q6PDB4 577 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 FAM103A1Q9BTL3 118 aaKnown RBP9.06□□□□□ -0.96
TCOF1-204ENST00000427724 ELOVL1Q9BW60 279 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 OR2D2Q9H210 308 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 GOLT1BQ9Y3E0 138 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 V9GYS6 101 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 KIAA1671Q9BY89 1806 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 COLCA2A8K830 154 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 UBE2CO00762 179 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 SNAI3Q3KNW1 292 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 Q5PR19 223 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 CHST5Q9GZS9 411 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 TGIF2-C20orf24A0A0A6YYL0 155 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 TRAV34A0A0B4J273 112 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 MGST3O14880 152 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 ADCYAP1P18509 176 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 RAB4AP20338 218 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 TAS2R60P59551 318 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 OR5C1Q8NGR4 320 aa9.06□□□□□ -0.96
TCOF1-204ENST00000427724 NUDT16L1Q9BRJ7 211 aaKnown RBP9.06□□□□□ -0.96
TCOF1-204ENST00000427724 MRPL37Q9BZE1 423 aaKnown RBP9.06□□□□□ -0.96
TCOF1-204ENST00000427724 OR8U8P0C7N1 319 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 MMP9P14780 707 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 SLC35B1P78383 322 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 OR5I1Q13606 314 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 PNKDQ8N490 385 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 OR2C3Q8N628 320 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 JMJD8Q96S16 334 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 PRDM14Q9GZV8 571 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 SLC2A9Q9NRM0 540 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 TMEM14DPA8MWL7 114 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 SYNGR1O43759 233 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 PGA5P0DJD9 388 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 USF1P22415 310 aaPredicted RBP9.05□□□□□ -0.96
TCOF1-204ENST00000427724 HTR1DP28221 377 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 PPP1CCP36873 323 aaKnown RBP9.05□□□□□ -0.96
TCOF1-204ENST00000427724 GPX4P36969 197 aaPredicted RBP9.05□□□□□ -0.96
TCOF1-204ENST00000427724 MPV17P39210 176 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 PSMB3P49720 205 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 FGF8P55075 233 aaPredicted RBP9.05□□□□□ -0.96
TCOF1-204ENST00000427724 PRB3Q04118 309 aaPredicted RBP9.05□□□□□ -0.96
TCOF1-204ENST00000427724 FNDC7Q5VTL7 733 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 TRAT1Q6PIZ9 186 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 MOB1BQ7L9L4 216 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 CYB561D1Q8N8Q1 229 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 MS4A10Q96PG2 267 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 SSBP3Q9BWW4 388 aaPredicted RBP9.05□□□□□ -0.96
TCOF1-204ENST00000427724 OR51I2Q9H344 312 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 OOEPA6NGQ2 149 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 RBP4P02753 201 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 PSG7Q13046 419 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 KCNMB1Q16558 191 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 PLAC9Q5JTB6 97 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 ZNRF1Q8ND25 227 aa9.05□□□□□ -0.96
TCOF1-204ENST00000427724 OR4F5Q8NH21 305 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms