RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 CX3CL1P78423 397 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 PSG9Q00887 426 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 KLF14Q8TD94 323 aaPredicted RBP15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 WFDC6Q9BQY6 131 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 FAM206AQ9NX38 181 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 PHLDA3Q9Y5J5 127 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 HS3ST3B1Q9Y662 390 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 FAM90A10PA6NDY2 464 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 FAM90A18PA6NE21 464 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 FAM90A16PA6NEW6 464 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 FAM90A20PA6NIJ5 464 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 FAM90A8PA6NJQ4 464 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 FAM90A7PA6NKC0 464 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 FAM90A22PA8MWA6 464 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 FAM90A12PA8MX19 464 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 FAM90A5PA8MXJ8 464 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 FAM90A23PA8MXZ1 464 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 FAM90A15PP0C7V4 464 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 FAM90A13PP0C7W8 464 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 FAM90A14PP0C7W9 464 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 FAM90A24PP0C7X0 464 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 ARF6P62330 175 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 EIF4EBP2Q13542 120 aaPredicted RBP15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 ZNF256Q9Y2P7 627 aaPredicted RBP15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 DOCK5Q9H7D0 1870 aa15.42■□□□□ 0.06
ARHGEF28-203ENST00000426542 PLAURQ03405 335 aa15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 QSER1Q2KHR3 1735 aa15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 NDUFA2O43678 99 aa15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 ANOS1P23352 680 aa15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 TAS2R60P59551 318 aa15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 LSM10Q969L4 123 aaKnown RBP15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 RNF115Q9Y4L5 304 aa15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 RNASE1P07998 156 aaKnown RBP15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 DNLZQ5SXM8 178 aa15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 LAMTOR1Q6IAA8 161 aa15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 ELF5Q9UKW6 265 aaPredicted RBP15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 DLEC1Q9Y238 1755 aa15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 FXYD3Q14802 87 aa15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 FAM106AQ4KMX7 169 aa15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 SPATA45Q537H7 98 aa15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 C2orf83Q53S99 150 aa15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 RAX2Q96IS3 184 aa15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 DUX5Q96PT3 197 aa15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 SIPA1L3O60292 1781 aaPredicted RBP15.41■□□□□ 0.06
ARHGEF28-203ENST00000426542 LOC105371242A0A075B767 164 aa15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 AMY1AP04745 511 aa15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 GPR61Q9BZJ8 451 aa15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 PLXNB2O15031 1838 aa15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 ZG16O60844 167 aa15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 ARL14EPLP0DKL9 152 aa15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 TMEM177Q53S58 311 aa15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 NUP214P35658 2090 aaPredicted RBP15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 TMEM238LA0A1B0GVL6 79 aa15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 A6NJY4 79 aa15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 MEF2BQ02080 365 aaPredicted RBP15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 IGHV3OR16-10A0A075B7F0 116 aa15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 C4orf51C9J302 202 aa15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 TRGC2P03986 189 aa15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 CTSBP07858 339 aa15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 SIGLEC5O15389 551 aa15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 HSPB1P04792 205 aaKnown RBP15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 SP9P0CG40 484 aa15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 DNAJC4Q9NNZ3 241 aa15.4■□□□□ 0.06
ARHGEF28-203ENST00000426542 S1PR2O95136 353 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 VKORC1L1Q8N0U8 176 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 FADS6Q8N9I5 356 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 TRAV30A0A087WSZ9 112 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 LOC107984156A0A0G2JMH3 177 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 SIAH2O43255 324 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 ZIC3O60481 467 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 MT-ND6P03923 174 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 THY1P04216 161 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 ARL17AQ8IVW1 177 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 MOB4Q9Y3A3 225 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 TMEM45BQ96B21 275 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 MAP1LC3AQ9H492 121 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 F5P12259 2224 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 OR4A47Q6IF82 309 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 QTRT1Q9BXR0 403 aaKnown RBP15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 MRPL18Q9H0U6 180 aaKnown RBP15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 RAXQ9Y2V3 346 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 H3BTX0 84 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 TCF21O43680 179 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 ATP5J2P56134 94 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 HSPE1P61604 102 aaKnown RBP15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 IFITM3Q01628 133 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 TEX29Q8N6K0 151 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 NEU1Q99519 415 aa15.39■□□□□ 0.05
ARHGEF28-203ENST00000426542 TRBV5-7A0A0A0MS05 114 aa15.38■□□□□ 0.05
ARHGEF28-203ENST00000426542 TNFRSF9Q07011 255 aa15.38■□□□□ 0.05
ARHGEF28-203ENST00000426542 CCL19Q99731 98 aa15.38■□□□□ 0.05
ARHGEF28-203ENST00000426542 RARRES2Q99969 163 aa15.38■□□□□ 0.05
ARHGEF28-203ENST00000426542 OR51M1Q9H341 326 aa15.38■□□□□ 0.05
ARHGEF28-203ENST00000426542 MARCH11A6NNE9 402 aa15.38■□□□□ 0.05
ARHGEF28-203ENST00000426542 EIF3GO75821 320 aaKnown RBP eCLIP15.38■□□□□ 0.05
ARHGEF28-203ENST00000426542 STARD6P59095 220 aa15.38■□□□□ 0.05
ARHGEF28-203ENST00000426542 COX6CP09669 75 aa15.38■□□□□ 0.05
ARHGEF28-203ENST00000426542 GLIPR1P48060 266 aa15.38■□□□□ 0.05
ARHGEF28-203ENST00000426542 SMUG1Q53HV7 270 aa15.38■□□□□ 0.05
ARHGEF28-203ENST00000426542 C1orf100Q5SVJ3 147 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms