RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ZNF833PQ6ZTB9 187 aa14.14□□□□□ -0.15
VCP-202ENST00000417448 H1FOOQ8IZA3 346 aaPredicted RBP14.14□□□□□ -0.15
VCP-202ENST00000417448 SNAPC3Q92966 411 aa14.14□□□□□ -0.15
VCP-202ENST00000417448 C5orf30Q96GV9 206 aa14.14□□□□□ -0.15
VCP-202ENST00000417448 EAF1Q96JC9 268 aaPredicted RBP14.14□□□□□ -0.15
VCP-202ENST00000417448 RBM14Q96PK6 669 aaKnown RBP14.14□□□□□ -0.15
VCP-202ENST00000417448 NABP2Q9BQ15 211 aa14.14□□□□□ -0.15
VCP-202ENST00000417448 AMY1AP04745 511 aa14.13□□□□□ -0.15
VCP-202ENST00000417448 AMY2AP04746 511 aa14.13□□□□□ -0.15
VCP-202ENST00000417448 CT45A6P0DMU7 189 aa14.13□□□□□ -0.15
VCP-202ENST00000417448 CT45A5P0DMU8 189 aa14.13□□□□□ -0.15
VCP-202ENST00000417448 CT45A7P0DMV0 189 aa14.13□□□□□ -0.15
VCP-202ENST00000417448 PRSS3P35030 304 aa14.13□□□□□ -0.15
VCP-202ENST00000417448 GPR12P47775 334 aa14.13□□□□□ -0.15
VCP-202ENST00000417448 DGCR2P98153 550 aa14.13□□□□□ -0.15
VCP-202ENST00000417448 LSAMPQ13449 338 aa14.13□□□□□ -0.15
VCP-202ENST00000417448 CNIH2Q6PI25 160 aa14.13□□□□□ -0.15
VCP-202ENST00000417448 EDARADDQ8WWZ3 215 aa14.13□□□□□ -0.15
VCP-202ENST00000417448 CMTM3Q96MX0 182 aa14.13□□□□□ -0.15
VCP-202ENST00000417448 OR2D2Q9H210 308 aa14.13□□□□□ -0.15
VCP-202ENST00000417448 IFT46Q9NQC8 304 aa14.13□□□□□ -0.15
VCP-202ENST00000417448 CCDC59Q9P031 241 aaKnown RBP14.13□□□□□ -0.15
VCP-202ENST00000417448 RAB29O14966 203 aa14.12□□□□□ -0.15
VCP-202ENST00000417448 OR2F2O95006 317 aa14.12□□□□□ -0.15
VCP-202ENST00000417448 CNTFRP26992 372 aa14.12□□□□□ -0.15
VCP-202ENST00000417448 ARPC4P59998 168 aa14.12□□□□□ -0.15
VCP-202ENST00000417448 ABCA11PQ4W5N1 156 aa14.12□□□□□ -0.15
VCP-202ENST00000417448 C9orf152Q5JTZ5 239 aa14.12□□□□□ -0.15
VCP-202ENST00000417448 THNSL2Q86YJ6 484 aa14.12□□□□□ -0.15
VCP-202ENST00000417448 OR4X2Q8NGF9 303 aa14.12□□□□□ -0.15
VCP-202ENST00000417448 SLIRPQ9GZT3 109 aaKnown RBP14.12□□□□□ -0.15
VCP-202ENST00000417448 C6orf62Q9GZU0 229 aaPredicted RBP14.12□□□□□ -0.15
VCP-202ENST00000417448 RSL24D1Q9UHA3 163 aaKnown RBP14.12□□□□□ -0.15
VCP-202ENST00000417448 ZNF221Q9UK13 617 aa14.12□□□□□ -0.15
VCP-202ENST00000417448 RBM7Q9Y580 266 aaKnown RBP14.12□□□□□ -0.15
VCP-202ENST00000417448 IGKV1D-13A0A0B4J2D9 117 aa14.11□□□□□ -0.15
VCP-202ENST00000417448 DPPA5A6NC42 116 aa14.11□□□□□ -0.15
VCP-202ENST00000417448 M0R1X1 148 aa14.11□□□□□ -0.15
VCP-202ENST00000417448 ITGB1BP1O14713 200 aa14.11□□□□□ -0.15
VCP-202ENST00000417448 PMP2P02689 132 aa14.11□□□□□ -0.15
VCP-202ENST00000417448 IGKV1-13P0DP09 117 aa14.11□□□□□ -0.15
VCP-202ENST00000417448 CD1BP29016 333 aa14.11□□□□□ -0.15
VCP-202ENST00000417448 THBS3P49746 956 aa14.11□□□□□ -0.15
VCP-202ENST00000417448 F2RL1P55085 397 aa14.11□□□□□ -0.15
VCP-202ENST00000417448 FAM131AQ6UXB0 335 aa14.11□□□□□ -0.15
VCP-202ENST00000417448 PRR25Q96S07 402 aa14.11□□□□□ -0.15
VCP-202ENST00000417448 ABHD1Q96SE0 405 aa14.11□□□□□ -0.15
VCP-202ENST00000417448 S1PR3Q99500 378 aa14.11□□□□□ -0.15
VCP-202ENST00000417448 TOLLIPQ9H0E2 274 aa14.11□□□□□ -0.15
VCP-202ENST00000417448 PIPOXQ9P0Z9 390 aa14.11□□□□□ -0.15
VCP-202ENST00000417448 NCBP2LA6PVI3 153 aaKnown RBP14.1□□□□□ -0.15
VCP-202ENST00000417448 LPLP06858 475 aa14.1□□□□□ -0.15
VCP-202ENST00000417448 AADACP22760 399 aa14.1□□□□□ -0.15
VCP-202ENST00000417448 RFX2P48378 723 aa14.1□□□□□ -0.15
VCP-202ENST00000417448 EBI3Q14213 229 aa14.1□□□□□ -0.15
VCP-202ENST00000417448 C18orf65Q6ZTR6 163 aa14.1□□□□□ -0.15
VCP-202ENST00000417448 LYSMD2Q8IV50 215 aa14.1□□□□□ -0.15
VCP-202ENST00000417448 Q8N6K4 173 aa14.1□□□□□ -0.15
VCP-202ENST00000417448 ZNF383Q8NA42 475 aa14.1□□□□□ -0.15
VCP-202ENST00000417448 OR2T10Q8NGZ9 312 aa14.1□□□□□ -0.15
VCP-202ENST00000417448 MCFD2Q8NI22 146 aa14.1□□□□□ -0.15
VCP-202ENST00000417448 GPX8Q8TED1 209 aa14.1□□□□□ -0.15
VCP-202ENST00000417448 MCRIP2Q9BUT9 160 aaKnown RBP14.1□□□□□ -0.15
VCP-202ENST00000417448 SDHAF2Q9NX18 166 aa14.1□□□□□ -0.15
VCP-202ENST00000417448 MOSP00540 346 aa14.09□□□□□ -0.15
VCP-202ENST00000417448 HLA-DMAP28067 261 aa14.09□□□□□ -0.15
VCP-202ENST00000417448 FCGR2CP31995 323 aa14.09□□□□□ -0.15
VCP-202ENST00000417448 CBX5P45973 191 aa14.09□□□□□ -0.15
VCP-202ENST00000417448 OR52I2Q8NH67 350 aa14.09□□□□□ -0.15
VCP-202ENST00000417448 GPHA2Q96T91 129 aa14.09□□□□□ -0.15
VCP-202ENST00000417448 PLSCR3Q9NRY6 295 aa14.09□□□□□ -0.15
VCP-202ENST00000417448 MOB4Q9Y3A3 225 aa14.09□□□□□ -0.15
VCP-202ENST00000417448 LINC01548A6NM66 108 aa14.08□□□□□ -0.16
VCP-202ENST00000417448 TXNL1O43396 289 aa14.08□□□□□ -0.16
VCP-202ENST00000417448 CTXN2P0C2S0 81 aa14.08□□□□□ -0.16
VCP-202ENST00000417448 OR5H8P0DN80 308 aa14.08□□□□□ -0.16
VCP-202ENST00000417448 LYL1P12980 280 aa14.08□□□□□ -0.16
VCP-202ENST00000417448 C5orf56Q8N8D9 126 aa14.08□□□□□ -0.16
VCP-202ENST00000417448 OR5AP2Q8NGF4 316 aa14.08□□□□□ -0.16
VCP-202ENST00000417448 DIRAS2Q96HU8 199 aa14.08□□□□□ -0.16
VCP-202ENST00000417448 ANAPC10Q9UM13 185 aa14.08□□□□□ -0.16
VCP-202ENST00000417448 OR2W1Q9Y3N9 320 aa14.08□□□□□ -0.16
VCP-202ENST00000417448 H0YJW9 148 aa14.07□□□□□ -0.16
VCP-202ENST00000417448 H7C2Y5 167 aa14.07□□□□□ -0.16
VCP-202ENST00000417448 DIRAS3O95661 229 aa14.07□□□□□ -0.16
VCP-202ENST00000417448 TNFSF8P32971 234 aa14.07□□□□□ -0.16
VCP-202ENST00000417448 LUMP51884 338 aaPredicted RBP14.07□□□□□ -0.16
VCP-202ENST00000417448 FXYD4P59646 89 aa14.07□□□□□ -0.16
VCP-202ENST00000417448 CDK10Q15131 360 aa14.07□□□□□ -0.16
VCP-202ENST00000417448 C8orf86Q6ZUL3 223 aa14.07□□□□□ -0.16
VCP-202ENST00000417448 Q8N9W7 124 aa14.07□□□□□ -0.16
VCP-202ENST00000417448 NXF2Q9GZY0 626 aaKnown RBP14.07□□□□□ -0.16
VCP-202ENST00000417448 EHFQ9NZC4 300 aa14.07□□□□□ -0.16
VCP-202ENST00000417448 KLK11Q9UBX7 282 aa14.07□□□□□ -0.16
VCP-202ENST00000417448 LINC00527Q9UJ94 153 aa14.07□□□□□ -0.16
VCP-202ENST00000417448 RAMP3O60896 148 aa14.06□□□□□ -0.16
VCP-202ENST00000417448 TUSC2O75896 110 aa14.06□□□□□ -0.16
VCP-202ENST00000417448 NAT1P18440 290 aa14.06□□□□□ -0.16
VCP-202ENST00000417448 ACTBP60709 375 aa14.06□□□□□ -0.16
VCP-202ENST00000417448 C16orf82Q7Z2V1 217 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms