RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 ZNF766Q5HY98 468 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 DCAF10Q5QP82 559 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 WDR31Q8NA23 367 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 OR10P1Q8NGE3 313 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 OR51G1Q8NGK1 321 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 OR5B12Q96R08 314 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 SLC25A22Q9H936 323 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 ZFHX4Q86UP3 3567 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 C9orf172C9J069 976 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 MKRN2OSH3BPM6 223 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 SMPD2O60906 423 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 CLDN14O95500 239 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 EGR1P18146 543 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 TMEM249Q2WGJ8 235 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 OR8G2PQ6IF36 304 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 ZNF66Q6ZN08 573 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 LRP11Q86VZ4 500 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 OR5T1Q8NG75 326 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 OR10G9Q8NGN4 311 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 OR10G7Q8NGN6 311 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 ACY3Q96HD9 319 aa8.22□□□□□ -1.09
CD44-206ENST00000415148 C19orf67A6NJJ6 358 aa8.21□□□□□ -1.09
CD44-206ENST00000415148 C17orf112F2Z3M2 114 aa8.21□□□□□ -1.09
CD44-206ENST00000415148 HAND1O96004 215 aa8.21□□□□□ -1.09
CD44-206ENST00000415148 NPPCP23582 126 aa8.21□□□□□ -1.09
CD44-206ENST00000415148 GALR1P47211 349 aa8.21□□□□□ -1.09
CD44-206ENST00000415148 MEOX1P50221 254 aa8.21□□□□□ -1.09
CD44-206ENST00000415148 FAM3BP58499 235 aaPredicted RBP8.21□□□□□ -1.09
CD44-206ENST00000415148 ZNF124Q15973 351 aa8.21□□□□□ -1.09
CD44-206ENST00000415148 CYB5R2Q6BCY4 276 aa8.21□□□□□ -1.09
CD44-206ENST00000415148 PRR7Q8TB68 274 aa8.21□□□□□ -1.09
CD44-206ENST00000415148 DOCK10Q96BY6 2186 aa8.21□□□□□ -1.09
CD44-206ENST00000415148 GUCD1Q96NT3 240 aa8.21□□□□□ -1.09
CD44-206ENST00000415148 CDX2Q99626 313 aaPredicted RBP8.21□□□□□ -1.09
CD44-206ENST00000415148 FUT9Q9Y231 359 aa8.21□□□□□ -1.09
CD44-206ENST00000415148 DNAJC13O75165 2243 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 A0A1W2PPQ1 181 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 ODAMA1E959 279 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 H7BYZ3 331 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 CDIPTO14735 213 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 NUPR1O60356 82 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 SRP14P37108 136 aaKnown RBP8.21□□□□□ -1.1
CD44-206ENST00000415148 MPLP40238 635 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 NUBP1P53384 320 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 SPATA46Q5T0L3 261 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 TMEM164Q5U3C3 297 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 ZNF709Q8N972 641 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 MDS2Q8NDY4 140 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 DTD1Q8TEA8 209 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 WDYHV1Q96HA8 205 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 BTF3L4Q96K17 158 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 TAAR6Q96RI8 345 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 DIRC2Q96SL1 478 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 C2orf88Q9BSF0 95 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 PARLQ9H300 379 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 C12orf49Q9H741 205 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 WASF3Q9UPY6 502 aa8.21□□□□□ -1.1
CD44-206ENST00000415148 DSPP15924 2871 aaKnown RBP8.21□□□□□ -1.1
CD44-206ENST00000415148 CACNA1DQ01668 2161 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 PPP5D1E7EU14 171 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 RAMP3O60896 148 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 HRASP01112 189 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 KRASP01116 189 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 CD33P20138 364 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 FGF7P21781 194 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 G6PCP35575 357 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 PDLIM4P50479 330 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 CASP6P55212 293 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 LINC00205P59089 165 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 TGFBR3Q03167 851 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 USF2Q15853 346 aaPredicted RBP8.2□□□□□ -1.1
CD44-206ENST00000415148 FFAR4Q5NUL3 377 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 TEX38Q6PEX7 206 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 TMPRSS7Q7RTY8 843 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 LURAP1Q96LR2 239 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 OR2J1Q9GZK6 312 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 OR2D2Q9H210 308 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 TUBG2Q9NRH3 451 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.2□□□□□ -1.1
CD44-206ENST00000415148 C12orf77C9JDV5 145 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 GGCTO75223 188 aaKnown RBP8.2□□□□□ -1.1
CD44-206ENST00000415148 WISP2O76076 250 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 TYMSP04818 313 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 OR3A1P47881 315 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 RPL30P62888 115 aaKnown RBP8.2□□□□□ -1.1
CD44-206ENST00000415148 TFF3Q07654 80 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 ACOT6Q3I5F7 207 aaPredicted RBP8.2□□□□□ -1.1
CD44-206ENST00000415148 SPINK9Q5DT21 86 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 LINC00696Q6ZRV3 163 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 H2BFWTQ7Z2G1 175 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 VASH2Q86V25 355 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 CISD2Q8N5K1 135 aaKnown RBP8.2□□□□□ -1.1
CD44-206ENST00000415148 OR1L1Q8NH94 360 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 FAM216AQ8WUB2 273 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 TMEM170AQ8WVE7 144 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 NINJ1Q92982 152 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 NEIL1Q96FI4 390 aaPredicted RBP8.2□□□□□ -1.1
CD44-206ENST00000415148 C5orf30Q96GV9 206 aa8.2□□□□□ -1.1
CD44-206ENST00000415148 GMPPAQ96IJ6 420 aaPredicted RBP8.2□□□□□ -1.1
CD44-206ENST00000415148 NEU1Q99519 415 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms