RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 QTRT1Q9BXR0 403 aaKnown RBP10.17□□□□□ -0.78
PTPRF-205ENST00000414879 C5orf66Q9H5L9 145 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 TMEM140Q9NV12 185 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 MARCH11A6NNE9 402 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 CEACAM18A8MTB9 384 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 MPZP25189 248 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 DSCR9P59020 149 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 UNC119Q13432 240 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 OR4P4Q8NGL7 312 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 P2RX4Q99571 388 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 ZNF430Q9H8G1 570 aaPredicted RBP10.17□□□□□ -0.78
PTPRF-205ENST00000414879 RAXQ9Y2V3 346 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 SERTM2A0A1B0GWG4 89 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 A0A1W2PRD5 423 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 A0A1W2PRF3 423 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 A0A1W2PRM7 423 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 TMEM218A2RU14 115 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 TNFRSF9Q07011 255 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 TMEM187Q14656 261 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 SPINK9Q5DT21 86 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 ZIC4Q8N9L1 334 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 SPRR3Q9UBC9 169 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 RCC1P18754 421 aaPredicted RBP10.17□□□□□ -0.78
PTPRF-205ENST00000414879 GLIPR1P48060 266 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 MFAP4P55083 255 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 ZNF273Q14593 569 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 DHRS11Q6UWP2 260 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 FAM89BQ8N5H3 189 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 TPRX1Q8N7U7 411 aa10.17□□□□□ -0.78
PTPRF-205ENST00000414879 NUP210Q8TEM1 1887 aaPredicted RBP10.16□□□□□ -0.78
PTPRF-205ENST00000414879 KBTBD11-OT1A0A1B0GTJ5 212 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 MBD3L4A6NDZ8 208 aaPredicted RBP10.16□□□□□ -0.78
PTPRF-205ENST00000414879 MBD3L3A6NE82 208 aaPredicted RBP10.16□□□□□ -0.78
PTPRF-205ENST00000414879 MBD3L5A6NJ08 208 aaPredicted RBP10.16□□□□□ -0.78
PTPRF-205ENST00000414879 DLK1P80370 383 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 RNF212Q495C1 297 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 NHLRC3Q5JS37 347 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 MBNL2Q5VZF2 373 aaKnown RBP10.16□□□□□ -0.78
PTPRF-205ENST00000414879 MBD3L2Q8NHZ7 208 aaPredicted RBP10.16□□□□□ -0.78
PTPRF-205ENST00000414879 GPR146Q96CH1 333 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 STARD4Q96DR4 205 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 DPM3Q9P2X0 92 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 CD8AP01732 235 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 PAX6P26367 422 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 TPPP2P59282 170 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 LINC01560Q8TB33 94 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 TNFRSF14Q92956 283 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 ELF5Q9UKW6 265 aaPredicted RBP10.16□□□□□ -0.78
PTPRF-205ENST00000414879 TCF20Q9UGU0 1960 aaKnown RBP10.16□□□□□ -0.78
PTPRF-205ENST00000414879 MST1P26927 711 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 FAM209BQ5JX69 171 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 DRAM1Q8N682 238 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 OR10G8Q8NGN5 311 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 BMPR1BO00238 502 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 UCP1P25874 307 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 RANP62826 216 aaKnown RBP10.16□□□□□ -0.78
PTPRF-205ENST00000414879 SPNS3Q6ZMD2 512 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 RBKSQ9H477 322 aa10.16□□□□□ -0.78
PTPRF-205ENST00000414879 FOXL2NBQ6ZUU3 175 aa10.15□□□□□ -0.78
PTPRF-205ENST00000414879 RTN4RQ9BZR6 473 aa10.15□□□□□ -0.78
PTPRF-205ENST00000414879 FA2HQ7L5A8 372 aa10.15□□□□□ -0.78
PTPRF-205ENST00000414879 C16orf82Q7Z2V1 217 aa10.15□□□□□ -0.78
PTPRF-205ENST00000414879 BLNKQ8WV28 456 aa10.15□□□□□ -0.78
PTPRF-205ENST00000414879 PSMG3Q9BT73 122 aaPredicted RBP10.15□□□□□ -0.78
PTPRF-205ENST00000414879 RALGAPA1Q6GYQ0 2036 aa10.15□□□□□ -0.79
PTPRF-205ENST00000414879 RIGQ13278 110 aa10.15□□□□□ -0.79
PTPRF-205ENST00000414879 SSBP3Q9BWW4 388 aaPredicted RBP10.15□□□□□ -0.79
PTPRF-205ENST00000414879 MRPL32Q9BYC8 188 aaKnown RBP10.15□□□□□ -0.79
PTPRF-205ENST00000414879 TRAPPC1Q9Y5R8 145 aa10.15□□□□□ -0.79
PTPRF-205ENST00000414879 SVILO95425 2214 aa10.15□□□□□ -0.79
PTPRF-205ENST00000414879 YPEL1O60688 119 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 HSBP1O75506 76 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 KLHDC1Q8N7A1 406 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 NECAP1Q8NC96 275 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 TMEM190Q8WZ59 177 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 YPEL2Q96QA6 119 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 DOK5Q9P104 306 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 CACNA1EQ15878 2313 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 HELTA6NFD8 242 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 OR2T8A6NH00 312 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 C12orf77C9JDV5 145 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 WNT9BO14905 357 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 NBL1P41271 181 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 REG1BP48304 166 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 ECSCRQ19T08 205 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 HLA-DRB5Q30154 266 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 IGFL3Q6UXB1 125 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 SPSB4Q96A44 273 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 PAXXQ9BUH6 204 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 PRR13Q9NZ81 148 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 TCF19Q9Y242 345 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 PXMP4Q9Y6I8 212 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 PLXNA4Q9HCM2 1894 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 ELOA3CA0A087WX78 387 aaPredicted RBP10.14□□□□□ -0.79
PTPRF-205ENST00000414879 PINLYPA6NC86 204 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 RBFOX2O43251 390 aaKnown RBP eCLIP10.14□□□□□ -0.798e-7■□□□□ 9.9
PTPRF-205ENST00000414879 KCNAB3O43448 404 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 MAS1LP35410 378 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 ST6GALNAC3Q8NDV1 305 aa10.14□□□□□ -0.79
PTPRF-205ENST00000414879 OR52M1Q8NGK5 317 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms