RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 FAM90A7PA6NKC0 464 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 FAM90A22PA8MWA6 464 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 FAM90A12PA8MX19 464 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 FAM90A5PA8MXJ8 464 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 FAM90A23PA8MXZ1 464 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 SPINK4O60575 86 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 FAM90A15PP0C7V4 464 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 FAM90A13PP0C7W8 464 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 FAM90A14PP0C7W9 464 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 FAM90A24PP0C7X0 464 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 TMEM14EPQ6UXP3 125 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 MAFAQ8NHW3 353 aaPredicted RBP12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 LSM10Q969L4 123 aaKnown RBP12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 IL17BQ9UHF5 180 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 FZR1Q9UM11 496 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 PDGFBP01127 241 aaPredicted RBP12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 SCCPDHQ8NBX0 429 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 RNASEH2CQ8TDP1 164 aaKnown RBP12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 TECTBQ96PL2 329 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 DUSP23Q9BVJ7 150 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 NPCDR1Q9BY65 106 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 FKBP11Q9NYL4 201 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 TRAPPC1Q9Y5R8 145 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 SPCS3P61009 180 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 GNG3P63215 75 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 ZNF705AQ6ZN79 300 aaPredicted RBP12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 Q6ZR03 302 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 TIPARPQ7Z3E1 657 aaKnown RBP12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 SPEM1Q8N4L4 309 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 HIPK2Q9H2X6 1198 aa12.24□□□□□ -0.45
SEMA3F-202ENST00000413852 TRBV20OR9-2A0A075B6H5 130 aa12.23□□□□□ -0.45
SEMA3F-202ENST00000413852 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.23□□□□□ -0.45
SEMA3F-202ENST00000413852 SLC17A3O00476 420 aa12.23□□□□□ -0.45
SEMA3F-202ENST00000413852 NXPH2O95156 264 aa12.23□□□□□ -0.45
SEMA3F-202ENST00000413852 CYB561P49447 251 aa12.23□□□□□ -0.45
SEMA3F-202ENST00000413852 CNN1P51911 297 aaKnown RBP12.23□□□□□ -0.45
SEMA3F-202ENST00000413852 MRGPRDQ8TDS7 321 aa12.23□□□□□ -0.45
SEMA3F-202ENST00000413852 TP53TG5Q9Y2B4 290 aa12.23□□□□□ -0.45
SEMA3F-202ENST00000413852 ICE1Q9Y2F5 2266 aa12.23□□□□□ -0.45
SEMA3F-202ENST00000413852 CTXND1A0A1B0GTU2 59 aa12.23□□□□□ -0.45
SEMA3F-202ENST00000413852 ZNF25P17030 456 aaPredicted RBP12.23□□□□□ -0.45
SEMA3F-202ENST00000413852 DTD1Q8TEA8 209 aa12.23□□□□□ -0.45
SEMA3F-202ENST00000413852 PINX1Q96BK5 328 aaKnown RBP12.23□□□□□ -0.45
SEMA3F-202ENST00000413852 OR2J1Q9GZK6 312 aa12.23□□□□□ -0.45
SEMA3F-202ENST00000413852 METRNQ9UJH8 293 aa12.23□□□□□ -0.45
SEMA3F-202ENST00000413852 PPIAL4AQ9Y536 164 aa12.23□□□□□ -0.45
SEMA3F-202ENST00000413852 PMS2P5A8MQ11 134 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 CBLN1P23435 193 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 ADMP35318 185 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 LHX2P50458 406 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 PRR31Q5SQ13 230 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 MDP1Q86V88 176 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 GBGT1Q8N5D6 347 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 TMEM18Q96B42 140 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 NEIL1Q96FI4 390 aaPredicted RBP12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 MANBALQ9NQG1 85 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 LIN7CQ9NUP9 197 aaKnown RBP12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 SSTR5P35346 364 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 IL11RAQ14626 422 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 ZNF497Q6ZNH5 498 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 LINC01551Q86U37 167 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 ZNF573Q86YE8 665 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 SAXO1Q8IYX7 474 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 SGMS2Q8NHU3 365 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 TBX15Q96SF7 602 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 LINC00473A8K010 186 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 CD82P27701 267 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 CDKN1AP38936 164 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 OR10P1Q8NGE3 313 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 AGMATQ9BSE5 352 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 PCED1AQ9H1Q7 454 aa12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 UBE2ZQ9H832 354 aaPredicted RBP12.22□□□□□ -0.45
SEMA3F-202ENST00000413852 LRRC30A6NM36 301 aa12.21□□□□□ -0.45
SEMA3F-202ENST00000413852 SLC25A6P12236 298 aa12.21□□□□□ -0.45
SEMA3F-202ENST00000413852 HOXA6P31267 233 aa12.21□□□□□ -0.45
SEMA3F-202ENST00000413852 SRSF7Q16629 238 aaKnown RBP eCLIP12.21□□□□□ -0.45
SEMA3F-202ENST00000413852 HLA-DRB5Q30154 266 aa12.21□□□□□ -0.45
SEMA3F-202ENST00000413852 NOL4LQ96MY1 436 aaPredicted RBP12.21□□□□□ -0.45
SEMA3F-202ENST00000413852 QTRT1Q9BXR0 403 aaKnown RBP12.21□□□□□ -0.45
SEMA3F-202ENST00000413852 MRPS17Q9Y2R5 130 aaKnown RBP12.21□□□□□ -0.45
SEMA3F-202ENST00000413852 C12orf77C9JDV5 145 aa12.21□□□□□ -0.46
SEMA3F-202ENST00000413852 CLDN18P56856 261 aa12.21□□□□□ -0.46
SEMA3F-202ENST00000413852 C21orf62-AS1Q17RA5 79 aa12.21□□□□□ -0.46
SEMA3F-202ENST00000413852 APH1AQ96BI3 265 aa12.21□□□□□ -0.46
SEMA3F-202ENST00000413852 MS4A10Q96PG2 267 aa12.21□□□□□ -0.46
SEMA3F-202ENST00000413852 RNF114Q9Y508 228 aa12.21□□□□□ -0.46
SEMA3F-202ENST00000413852 TNRC18O15417 2968 aaPredicted RBP12.21□□□□□ -0.46
SEMA3F-202ENST00000413852 SCO2A0A1W2PP80 73 aa12.2□□□□□ -0.46
SEMA3F-202ENST00000413852 RRHO14718 337 aa12.2□□□□□ -0.46
SEMA3F-202ENST00000413852 DNPH1O43598 174 aa12.2□□□□□ -0.46
SEMA3F-202ENST00000413852 COX5BP10606 129 aa12.2□□□□□ -0.46
SEMA3F-202ENST00000413852 SLC35B1P78383 322 aa12.2□□□□□ -0.46
SEMA3F-202ENST00000413852 PLP2Q04941 152 aa12.2□□□□□ -0.46
SEMA3F-202ENST00000413852 SSMEM1Q8WWF3 244 aa12.2□□□□□ -0.46
SEMA3F-202ENST00000413852 PAM16Q9Y3D7 125 aa12.2□□□□□ -0.46
SEMA3F-202ENST00000413852 GGCTO75223 188 aaKnown RBP12.2□□□□□ -0.46
SEMA3F-202ENST00000413852 GCGP01275 180 aa12.2□□□□□ -0.46
SEMA3F-202ENST00000413852 CDC34P49427 236 aaPredicted RBP12.2□□□□□ -0.46
SEMA3F-202ENST00000413852 RPL15P61313 204 aaKnown RBP12.2□□□□□ -0.46
SEMA3F-202ENST00000413852 UTF1Q5T230 341 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms