RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 TSC22D2O75157 780 aa10.16□□□□□ -0.78
CHMP3-204ENST00000409727 IGKV1-5P01602 117 aa10.16□□□□□ -0.78
CHMP3-204ENST00000409727 VDAC1P21796 283 aa10.16□□□□□ -0.78
CHMP3-204ENST00000409727 C11orf87Q6NUJ2 197 aa10.16□□□□□ -0.78
CHMP3-204ENST00000409727 PNKDQ8N490 385 aa10.16□□□□□ -0.78
CHMP3-204ENST00000409727 Q8N7P7 452 aa10.16□□□□□ -0.78
CHMP3-204ENST00000409727 THAP6Q8TBB0 222 aa10.16□□□□□ -0.78
CHMP3-204ENST00000409727 IL22RA2Q969J5 263 aa10.16□□□□□ -0.78
CHMP3-204ENST00000409727 MBD2Q9UBB5 411 aa10.16□□□□□ -0.78
CHMP3-204ENST00000409727 TACC2O95359 2948 aa10.16□□□□□ -0.78
CHMP3-204ENST00000409727 A0A087X0M5 115 aa10.15□□□□□ -0.78
CHMP3-204ENST00000409727 A0A1B0GX30 115 aa10.15□□□□□ -0.78
CHMP3-204ENST00000409727 FAM157AC9JC47 383 aa10.15□□□□□ -0.78
CHMP3-204ENST00000409727 NMSQ5H8A3 153 aa10.15□□□□□ -0.78
CHMP3-204ENST00000409727 THOC7Q6I9Y2 204 aaKnown RBP10.15□□□□□ -0.78
CHMP3-204ENST00000409727 ZNF383Q8NA42 475 aa10.15□□□□□ -0.78
CHMP3-204ENST00000409727 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.15□□□□□ -0.78
CHMP3-204ENST00000409727 GPR146Q96CH1 333 aa10.15□□□□□ -0.78
CHMP3-204ENST00000409727 RRNAD1Q96FB5 475 aaKnown RBP10.15□□□□□ -0.78
CHMP3-204ENST00000409727 CLEC7AQ9BXN2 247 aa10.15□□□□□ -0.78
CHMP3-204ENST00000409727 GSX2Q9BZM3 304 aa10.15□□□□□ -0.78
CHMP3-204ENST00000409727 PRELID3BQ9Y3B1 194 aa10.15□□□□□ -0.78
CHMP3-204ENST00000409727 DUXBA0A1W2PPF3 345 aa10.15□□□□□ -0.79
CHMP3-204ENST00000409727 A0A1W2PRD5 423 aa10.15□□□□□ -0.79
CHMP3-204ENST00000409727 A0A1W2PRF3 423 aa10.15□□□□□ -0.79
CHMP3-204ENST00000409727 A0A1W2PRM7 423 aa10.15□□□□□ -0.79
CHMP3-204ENST00000409727 NDUFS8O00217 210 aa10.15□□□□□ -0.79
CHMP3-204ENST00000409727 ENSAO43768 121 aaKnown RBP10.15□□□□□ -0.79
CHMP3-204ENST00000409727 MBPP02686 304 aaPredicted RBP10.15□□□□□ -0.79
CHMP3-204ENST00000409727 KLRD1Q13241 179 aa10.15□□□□□ -0.79
CHMP3-204ENST00000409727 IL15RAQ13261 267 aa10.15□□□□□ -0.79
CHMP3-204ENST00000409727 CLEC12BQ2HXU8 276 aa10.15□□□□□ -0.79
CHMP3-204ENST00000409727 LGALSLQ3ZCW2 172 aaPredicted RBP10.15□□□□□ -0.79
CHMP3-204ENST00000409727 SSX9Q7RTT3 188 aa10.15□□□□□ -0.79
CHMP3-204ENST00000409727 ZNF546Q86UE3 836 aa10.15□□□□□ -0.79
CHMP3-204ENST00000409727 DCUN1D4Q92564 292 aa10.15□□□□□ -0.79
CHMP3-204ENST00000409727 MRPL20Q9BYC9 149 aaKnown RBP10.15□□□□□ -0.79
CHMP3-204ENST00000409727 OR5AC2Q9NZP5 309 aa10.15□□□□□ -0.79
CHMP3-204ENST00000409727 CACNG5Q9UF02 275 aa10.15□□□□□ -0.79
CHMP3-204ENST00000409727 GAB2Q9UQC2 676 aa10.15□□□□□ -0.79
CHMP3-204ENST00000409727 VWC2LB2RUY7 222 aa10.14□□□□□ -0.79
CHMP3-204ENST00000409727 H0YIZ8 118 aa10.14□□□□□ -0.79
CHMP3-204ENST00000409727 RBP4P02753 201 aa10.14□□□□□ -0.79
CHMP3-204ENST00000409727 CT45A6P0DMU7 189 aa10.14□□□□□ -0.79
CHMP3-204ENST00000409727 CT45A5P0DMU8 189 aa10.14□□□□□ -0.79
CHMP3-204ENST00000409727 CT45A7P0DMV0 189 aa10.14□□□□□ -0.79
CHMP3-204ENST00000409727 CXCL2P19875 107 aa10.14□□□□□ -0.79
CHMP3-204ENST00000409727 THBS3P49746 956 aa10.14□□□□□ -0.79
CHMP3-204ENST00000409727 PRRX1P54821 245 aa10.14□□□□□ -0.79
CHMP3-204ENST00000409727 Q6ZRM9 215 aa10.14□□□□□ -0.79
CHMP3-204ENST00000409727 ZNF833PQ6ZTB9 187 aa10.14□□□□□ -0.79
CHMP3-204ENST00000409727 VKORC1L1Q8N0U8 176 aa10.14□□□□□ -0.79
CHMP3-204ENST00000409727 OR1S1Q8NH92 325 aa10.14□□□□□ -0.79
CHMP3-204ENST00000409727 CD300LFQ8TDQ1 290 aa10.14□□□□□ -0.79
CHMP3-204ENST00000409727 SPIN2AQ99865 258 aa10.14□□□□□ -0.79
CHMP3-204ENST00000409727 SPIN2BQ9BPZ2 258 aa10.14□□□□□ -0.79
CHMP3-204ENST00000409727 IGHV2-70DA0A0C4DH43 119 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 M0R1W7 72 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 CRYZL1O95825 349 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 ARG1P05089 322 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 CXorf66Q5JRM2 361 aaPredicted RBP10.13□□□□□ -0.79
CHMP3-204ENST00000409727 VMO1Q7Z5L0 202 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 LINC00311Q8N616 119 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 OR4D5Q8NGN0 318 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 DDB2Q92466 427 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 R3HDM4Q96D70 268 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 PCGF1Q9BSM1 259 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 RNF126Q9BV68 326 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 MAGT1Q9H0U3 335 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 CELSR2Q9HCU4 2923 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 MARCH11A6NNE9 402 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 L7N2F9 121 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 FOXH1O75593 365 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 PET100P0DJ07 73 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 PAX1P15863 534 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 SMCO1Q147U7 214 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 HLA-DRB5Q30154 266 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 TCTEX1D1Q8N7M0 179 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 C8orf31Q8N9H6 132 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 DMBX1Q8NFW5 382 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 OR13D1Q8NGV5 346 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 ZNF596Q8TC21 504 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 TMEM186Q96B77 213 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 MFFQ9GZY8 342 aa10.13□□□□□ -0.79
CHMP3-204ENST00000409727 MED13LQ71F56 2210 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 PIGBOS1A0A0B4J2F0 54 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 HMSDA8MTL9 139 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 A8MXK9 166 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 BUB1B-PAK6H3BSN5 160 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 H7C2Y5 167 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 K7EPK0 472 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 HPRT1P00492 218 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 IGLV1-47P01700 117 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 IGKV1-16P04430 117 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 SLC25A4P12235 298 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 IL3RAP26951 378 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 NKX2-1P43699 371 aaPredicted RBP10.12□□□□□ -0.79
CHMP3-204ENST00000409727 PAX2Q02962 417 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 DEFB113Q30KQ7 82 aa10.12□□□□□ -0.79
CHMP3-204ENST00000409727 PRSS54Q6PEW0 395 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms