RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 VWA1Q6PCB0 445 aa10.81□□□□□ -0.68
HERC3-203ENST00000407637 C16orf47Q6ZP98 133 aaPredicted RBP10.81□□□□□ -0.68
HERC3-203ENST00000407637 OR1L1Q8NH94 360 aa10.81□□□□□ -0.68
HERC3-203ENST00000407637 WFDC12Q8WWY7 111 aa10.81□□□□□ -0.68
HERC3-203ENST00000407637 EXPH5Q8NEV8 1989 aa10.81□□□□□ -0.68
HERC3-203ENST00000407637 TRAV8-6A0A0B4J262 113 aa10.81□□□□□ -0.68
HERC3-203ENST00000407637 OTX2P32243 289 aa10.81□□□□□ -0.68
HERC3-203ENST00000407637 RPEL1Q2QD12 228 aa10.81□□□□□ -0.68
HERC3-203ENST00000407637 GCSAMLQ5JQS6 135 aa10.81□□□□□ -0.68
HERC3-203ENST00000407637 FAM71F2Q6NXP2 309 aa10.81□□□□□ -0.68
HERC3-203ENST00000407637 MMD2Q8IY49 270 aa10.81□□□□□ -0.68
HERC3-203ENST00000407637 DEFB125Q8N687 156 aa10.81□□□□□ -0.68
HERC3-203ENST00000407637 C10orf35Q96D05 121 aa10.81□□□□□ -0.68
HERC3-203ENST00000407637 GNB1LQ9BYB4 327 aa10.81□□□□□ -0.68
HERC3-203ENST00000407637 SOHLH2Q9NX45 425 aa10.81□□□□□ -0.68
HERC3-203ENST00000407637 COL5A1P20908 1838 aaPredicted RBP10.8□□□□□ -0.68
HERC3-203ENST00000407637 TRAV38-1A0A0B4J264 116 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 CXCL10P02778 98 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 SRD5A2P31213 254 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 SLC35B1P78383 322 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 BVES-AS1Q5T3Y7 98 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 TMEM14EPQ6UXP3 125 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 OR10P1Q8NGE3 313 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 SLC37A2Q8TED4 501 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 NPCDR1Q9BY65 106 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 UNC13CQ8NB66 2214 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 TRBV9A0A0B4J1U6 114 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 A0A1W2PNR3 127 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 TMEM150CB9EJG8 249 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 G3V3Y1 287 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 H0YJW9 148 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 RAB29O14966 203 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 EFNA2O43921 213 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 REG1AP05451 166 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 APOBEC3AP31941 199 aaPredicted RBP10.8□□□□□ -0.68
HERC3-203ENST00000407637 ARF6P62330 175 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 RHOBP62745 196 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 NHLH1Q02575 133 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 TRIP6Q15654 476 aaKnown RBP10.8□□□□□ -0.68
HERC3-203ENST00000407637 PRAMEF20Q5VT98 475 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 Q6ZSR3 168 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 LHFPL2Q6ZUX7 228 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 ST8SIA1Q92185 356 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 TMEM147Q9BVK8 224 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 SELENOKQ9Y6D0 94 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 KMT2EQ8IZD2 1858 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 CHD7Q9P2D1 2997 aa10.8□□□□□ -0.68
HERC3-203ENST00000407637 ESPL1Q14674 2120 aa10.79□□□□□ -0.68
HERC3-203ENST00000407637 TMEM136Q6ZRR5 245 aa10.79□□□□□ -0.68
HERC3-203ENST00000407637 GJC3Q8NFK1 279 aa10.79□□□□□ -0.68
HERC3-203ENST00000407637 OR7C2O60412 319 aa10.79□□□□□ -0.68
HERC3-203ENST00000407637 SMPD2O60906 423 aa10.79□□□□□ -0.68
HERC3-203ENST00000407637 CELA2BP08218 269 aaPredicted RBP10.79□□□□□ -0.68
HERC3-203ENST00000407637 MSR1P21757 451 aa10.79□□□□□ -0.68
HERC3-203ENST00000407637 GATA2P23769 480 aaPredicted RBP10.79□□□□□ -0.68
HERC3-203ENST00000407637 ZNF157P51786 506 aaPredicted RBP10.79□□□□□ -0.68
HERC3-203ENST00000407637 PAX2Q02962 417 aa10.79□□□□□ -0.68
HERC3-203ENST00000407637 LHX8Q68G74 356 aa10.79□□□□□ -0.68
HERC3-203ENST00000407637 EBLN2Q6P2I7 272 aa10.79□□□□□ -0.68
HERC3-203ENST00000407637 SPATA12Q7Z6I5 190 aa10.79□□□□□ -0.68
HERC3-203ENST00000407637 FER1L6-AS1Q8NA97 138 aa10.79□□□□□ -0.68
HERC3-203ENST00000407637 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.79□□□□□ -0.68
HERC3-203ENST00000407637 MANSC4A6NHS7 340 aaPredicted RBP10.78□□□□□ -0.68
HERC3-203ENST00000407637 BMPR1BO00238 502 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 ZNF16P17020 682 aaPredicted RBP10.78□□□□□ -0.68
HERC3-203ENST00000407637 S100GP29377 79 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 CA7P43166 264 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 LGALS7P47929 136 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 CCR5P51681 352 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 HIST3H3Q16695 136 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 PRSS57Q6UWY2 283 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 LSM10Q969L4 123 aaKnown RBP10.78□□□□□ -0.68
HERC3-203ENST00000407637 CHODLQ9H9P2 273 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 PLEK2Q9NYT0 353 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 CRIM1Q9NZV1 1036 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 RARRES3Q9UL19 164 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 M0R1X1 148 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 RAMP3O60896 148 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 NTSR1P30989 418 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 RBPJQ06330 500 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 IGFBP7Q16270 282 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 LMX1AQ8TE12 382 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 RLN3Q8WXF3 142 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 STRADBQ9C0K7 418 aa10.78□□□□□ -0.68
HERC3-203ENST00000407637 GJE1A6NN92 205 aa10.77□□□□□ -0.68
HERC3-203ENST00000407637 G3V4G9 280 aa10.77□□□□□ -0.68
HERC3-203ENST00000407637 GNG7O60262 68 aa10.77□□□□□ -0.68
HERC3-203ENST00000407637 IGLC1P0CG04 106 aa10.77□□□□□ -0.68
HERC3-203ENST00000407637 OTX1P32242 354 aaPredicted RBP10.77□□□□□ -0.68
HERC3-203ENST00000407637 TCL1AP56279 114 aa10.77□□□□□ -0.68
HERC3-203ENST00000407637 SAMD13Q5VXD3 122 aa10.77□□□□□ -0.68
HERC3-203ENST00000407637 PLCXD3Q63HM9 321 aa10.77□□□□□ -0.68
HERC3-203ENST00000407637 Q6ZS49 121 aa10.77□□□□□ -0.68
HERC3-203ENST00000407637 ZNF439Q8NDP4 499 aa10.77□□□□□ -0.68
HERC3-203ENST00000407637 OR1B1Q8NGR6 318 aa10.77□□□□□ -0.68
HERC3-203ENST00000407637 OR1N2Q8NGR9 330 aa10.77□□□□□ -0.68
HERC3-203ENST00000407637 OR4S2Q8NH73 311 aa10.77□□□□□ -0.68
HERC3-203ENST00000407637 GP6Q9HCN6 339 aa10.77□□□□□ -0.68
HERC3-203ENST00000407637 GPR27Q9NS67 375 aa10.77□□□□□ -0.68
HERC3-203ENST00000407637 ATP23Q9Y6H3 246 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms