RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 ENY2Q9NPA8 101 aa10.02□□□□□ -0.81
PCNX4-204ENST00000406949 TMEM210A6NLX4 147 aa10.02□□□□□ -0.81
PCNX4-204ENST00000406949 MMP9P14780 707 aa10.02□□□□□ -0.81
PCNX4-204ENST00000406949 HABP2Q14520 560 aaPredicted RBP10.02□□□□□ -0.81
PCNX4-204ENST00000406949 FAM201AQ5SY85 155 aa10.02□□□□□ -0.81
PCNX4-204ENST00000406949 Q6ZS49 121 aa10.02□□□□□ -0.81
PCNX4-204ENST00000406949 KDF1Q8NAX2 398 aaPredicted RBP10.02□□□□□ -0.81
PCNX4-204ENST00000406949 OR13A1Q8NGR1 328 aa10.02□□□□□ -0.81
PCNX4-204ENST00000406949 ZNF737O75373 536 aa10.01□□□□□ -0.81
PCNX4-204ENST00000406949 NDUFB7P17568 137 aa10.01□□□□□ -0.81
PCNX4-204ENST00000406949 PSMB3P49720 205 aa10.01□□□□□ -0.81
PCNX4-204ENST00000406949 TNFRSF9Q07011 255 aa10.01□□□□□ -0.81
PCNX4-204ENST00000406949 PDLIM3Q53GG5 364 aaPredicted RBP10.01□□□□□ -0.81
PCNX4-204ENST00000406949 VKORC1L1Q8N0U8 176 aa10.01□□□□□ -0.81
PCNX4-204ENST00000406949 ZNF645Q8N7E2 425 aa10.01□□□□□ -0.81
PCNX4-204ENST00000406949 Q8NFD4 153 aa10.01□□□□□ -0.81
PCNX4-204ENST00000406949 ZDHHC11Q9H8X9 412 aa10.01□□□□□ -0.81
PCNX4-204ENST00000406949 TLN1Q9Y490 2541 aaKnown RBP10.01□□□□□ -0.81
PCNX4-204ENST00000406949 KIAA1324LA8MWY0 1029 aaPredicted RBP10.01□□□□□ -0.81
PCNX4-204ENST00000406949 MLNRO43193 412 aa10.01□□□□□ -0.81
PCNX4-204ENST00000406949 IGKV1-39P01597 117 aa10.01□□□□□ -0.81
PCNX4-204ENST00000406949 IGKV1D-39P04432 117 aa10.01□□□□□ -0.81
PCNX4-204ENST00000406949 PRDX2P32119 198 aa10.01□□□□□ -0.81
PCNX4-204ENST00000406949 PAX9P55771 341 aa10.01□□□□□ -0.81
PCNX4-204ENST00000406949 ARL16Q0P5N6 197 aa10.01□□□□□ -0.81
PCNX4-204ENST00000406949 PLA2G2CQ5R387 149 aa10.01□□□□□ -0.81
PCNX4-204ENST00000406949 ZNRF1Q8ND25 227 aa10.01□□□□□ -0.81
PCNX4-204ENST00000406949 GTF3AQ92664 365 aaKnown RBP10.01□□□□□ -0.81
PCNX4-204ENST00000406949 CABLES2Q9BTV7 478 aa10.01□□□□□ -0.81
PCNX4-204ENST00000406949 IQCF6A8MYZ5 107 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 PRR33A8MZF0 331 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 SS18L1O75177 396 aaPredicted RBP10□□□□□ -0.81
PCNX4-204ENST00000406949 SRP19P09132 144 aaKnown RBP10□□□□□ -0.81
PCNX4-204ENST00000406949 DEFA4P12838 97 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 KIR2DL2P43627 348 aaPredicted RBP10□□□□□ -0.81
PCNX4-204ENST00000406949 RPS23P62266 143 aaKnown RBP10□□□□□ -0.81
PCNX4-204ENST00000406949 RPL30P62888 115 aaKnown RBP10□□□□□ -0.81
PCNX4-204ENST00000406949 MZT1Q08AG7 82 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 LSM10Q969L4 123 aaKnown RBP10□□□□□ -0.81
PCNX4-204ENST00000406949 RCC1LQ96I51 464 aaKnown RBP10□□□□□ -0.81
PCNX4-204ENST00000406949 OR5B12Q96R08 314 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 TMPRSS5Q9H3S3 457 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 GAB2Q9UQC2 676 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 ODAMA1E959 279 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 KLK10O43240 276 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 ICAM4Q14773 271 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 ACP7Q6ZNF0 438 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 OR10G4Q8NGN3 311 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 OR10G9Q8NGN4 311 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 OR10G7Q8NGN6 311 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 TAF15Q92804 592 aaKnown RBP eCLIP10□□□□□ -0.81
PCNX4-204ENST00000406949 R3HDM4Q96D70 268 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 GFOD1Q9NXC2 390 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 YIF1AO95070 293 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 OPN1MWP04001 364 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 OR8U8P0C7N1 319 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 OPN1MW2P0DN77 364 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 OPN1MW3P0DN78 364 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 BCL2P10415 239 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 SRSF7Q16629 238 aaKnown RBP eCLIP10□□□□□ -0.81
PCNX4-204ENST00000406949 ZNF525Q8N782 197 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 EDARADDQ8WWZ3 215 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 OR2V2Q96R30 315 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 TAAR6Q96RI8 345 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 ZGRF1Q86YA3 2104 aa10□□□□□ -0.81
PCNX4-204ENST00000406949 IRF2P14316 349 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 ZNF585BQ52M93 769 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 SPSB3Q6PJ21 355 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 CLEC2AQ6UVW9 174 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 WDR82Q6UXN9 313 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 LRP11Q86VZ4 500 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 AURKAIP1Q9NWT8 199 aaPredicted RBP9.99□□□□□ -0.81
PCNX4-204ENST00000406949 RNF115Q9Y4L5 304 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 WIPI2Q9Y4P8 454 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 TGIF2-C20orf24A0A0A6YYL0 155 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 COX5AP20674 150 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 KHDC3LQ587J8 217 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 PINX1Q96BK5 328 aaKnown RBP9.99□□□□□ -0.81
PCNX4-204ENST00000406949 S1PR3Q99500 378 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 HSPB1P04792 205 aaKnown RBP9.99□□□□□ -0.81
PCNX4-204ENST00000406949 WT1P19544 449 aaPredicted RBP9.99□□□□□ -0.81
PCNX4-204ENST00000406949 HNF1AP20823 631 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 S100A7P31151 101 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 KLF3P57682 345 aaPredicted RBP9.99□□□□□ -0.81
PCNX4-204ENST00000406949 ZNF146Q15072 292 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 Q5PR19 223 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 ZNF880Q6PDB4 577 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 C1orf87Q8N0U7 546 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 CLDND2Q8NHS1 167 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 HIPK2Q9H2X6 1198 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 GP6Q9HCN6 339 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 CLCF1Q9UBD9 225 aa9.99□□□□□ -0.81
PCNX4-204ENST00000406949 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.99□□□□□ -0.815e-7■■■■■ 38.3
PCNX4-204ENST00000406949 SPTBN4Q9H254 2564 aa9.98□□□□□ -0.81
PCNX4-204ENST00000406949 IGHV2OR16-5A0A0B4J2B6 119 aa9.98□□□□□ -0.81
PCNX4-204ENST00000406949 SLC25A6P12236 298 aa9.98□□□□□ -0.81
PCNX4-204ENST00000406949 TMEM41BQ5BJD5 291 aa9.98□□□□□ -0.81
PCNX4-204ENST00000406949 NCR3LG1Q68D85 454 aa9.98□□□□□ -0.81
PCNX4-204ENST00000406949 WFDC8Q8IUA0 241 aa9.98□□□□□ -0.81
PCNX4-204ENST00000406949 TMEM147Q9BVK8 224 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms