RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 TSTD1Q8NFU3 115 aa13.77□□□□□ -0.21
COL4A3BP-204ENST00000405807 OR1F12Q8NHA8 337 aa13.77□□□□□ -0.21
COL4A3BP-204ENST00000405807 SPXQ9BT56 116 aa13.77□□□□□ -0.21
COL4A3BP-204ENST00000405807 ZNF391Q9UJN7 358 aa13.77□□□□□ -0.21
COL4A3BP-204ENST00000405807 K7EQM0 130 aa13.76□□□□□ -0.21
COL4A3BP-204ENST00000405807 HAND1O96004 215 aa13.76□□□□□ -0.21
COL4A3BP-204ENST00000405807 GPR6P46095 362 aaPredicted RBP13.76□□□□□ -0.21
COL4A3BP-204ENST00000405807 OR51G1Q8NGK1 321 aa13.76□□□□□ -0.21
COL4A3BP-204ENST00000405807 DEFB126Q9BYW3 111 aa13.76□□□□□ -0.21
COL4A3BP-204ENST00000405807 UNC13CQ8NB66 2214 aa13.76□□□□□ -0.21
COL4A3BP-204ENST00000405807 VPS13AQ96RL7 3174 aa13.76□□□□□ -0.21
COL4A3BP-204ENST00000405807 BCL2P10415 239 aa13.76□□□□□ -0.21
COL4A3BP-204ENST00000405807 PRSS12P56730 875 aa13.76□□□□□ -0.21
COL4A3BP-204ENST00000405807 WDR74Q6RFH5 385 aaPredicted RBP13.76□□□□□ -0.21
COL4A3BP-204ENST00000405807 ZNF818PQ6ZRF7 136 aa13.76□□□□□ -0.21
COL4A3BP-204ENST00000405807 GAPTQ8N292 157 aa13.76□□□□□ -0.21
COL4A3BP-204ENST00000405807 PLPPR1Q8TBJ4 325 aa13.76□□□□□ -0.21
COL4A3BP-204ENST00000405807 GEMIN7Q9H840 131 aaKnown RBP13.76□□□□□ -0.21
COL4A3BP-204ENST00000405807 Q6ZS49 121 aa13.75□□□□□ -0.21
COL4A3BP-204ENST00000405807 ZNF837Q96EG3 531 aaPredicted RBP13.75□□□□□ -0.21
COL4A3BP-204ENST00000405807 UCN2Q96RP3 112 aa13.75□□□□□ -0.21
COL4A3BP-204ENST00000405807 SDF2L1Q9HCN8 221 aa13.75□□□□□ -0.21
COL4A3BP-204ENST00000405807 NAT8Q9UHE5 227 aa13.75□□□□□ -0.21
COL4A3BP-204ENST00000405807 OR51B2Q9Y5P1 312 aa13.75□□□□□ -0.21
COL4A3BP-204ENST00000405807 MYO9BQ13459 2157 aa13.75□□□□□ -0.21
COL4A3BP-204ENST00000405807 IGHV2-26A0A0B4J1V2 119 aa13.75□□□□□ -0.21
COL4A3BP-204ENST00000405807 SPAARA0A1B0GVQ0 90 aa13.75□□□□□ -0.21
COL4A3BP-204ENST00000405807 ZFP92A6NM28 416 aa13.75□□□□□ -0.21
COL4A3BP-204ENST00000405807 NXPH1P58417 271 aa13.75□□□□□ -0.21
COL4A3BP-204ENST00000405807 HLA-BQ31612 363 aa13.75□□□□□ -0.21
COL4A3BP-204ENST00000405807 CALHM1Q8IU99 346 aa13.75□□□□□ -0.21
COL4A3BP-204ENST00000405807 P2RX4Q99571 388 aa13.75□□□□□ -0.21
COL4A3BP-204ENST00000405807 FAM166BA8MTA8 275 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 DIRC3C9JPN6 131 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 H0Y8G0 127 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 CNIH1O95406 144 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 TSPAN13O95857 204 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 GALR1P47211 349 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 NPBWR2P48146 333 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 PAX9P55771 341 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 PSG9Q00887 426 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 PLCXD3Q63HM9 321 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 ZNF787Q6DD87 383 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 CCDC144NLQ6NUI1 221 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 C16orf82Q7Z2V1 217 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 KLHDC1Q8N7A1 406 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 OR5B12Q96R08 314 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 PATZ1Q9HBE1 687 aaKnown RBP13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 CHCHD2Q9Y6H1 151 aaPredicted RBP13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 SLC33A1O00400 549 aaPredicted RBP13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 TNFSF12O43508 249 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 NXPH3O95157 252 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 OR5AU1Q8NGC0 362 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 OR5D13Q8NGL4 314 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 SCGB1C1Q8TD33 95 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 NAT6Q93015 286 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 TMEM45BQ96B21 275 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 PARLQ9H300 379 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 MANBALQ9NQG1 85 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 THYN1Q9P016 225 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 TNFRSF18Q9Y5U5 241 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 ASXL3Q9C0F0 2248 aa13.74□□□□□ -0.21
COL4A3BP-204ENST00000405807 DKK1O94907 266 aa13.73□□□□□ -0.21
COL4A3BP-204ENST00000405807 JMJD7P0C870 316 aa13.73□□□□□ -0.21
COL4A3BP-204ENST00000405807 MYF5P13349 255 aa13.73□□□□□ -0.21
COL4A3BP-204ENST00000405807 CD99P14209 185 aa13.73□□□□□ -0.21
COL4A3BP-204ENST00000405807 KIAA1644Q3SXP7 199 aa13.73□□□□□ -0.21
COL4A3BP-204ENST00000405807 ZIC4Q8N9L1 334 aa13.73□□□□□ -0.21
COL4A3BP-204ENST00000405807 PIGCQ92535 297 aa13.73□□□□□ -0.21
COL4A3BP-204ENST00000405807 MED12Q93074 2177 aa13.73□□□□□ -0.21
COL4A3BP-204ENST00000405807 SIVA1O15304 175 aa13.73□□□□□ -0.21
COL4A3BP-204ENST00000405807 RPS18P62269 152 aaKnown RBP13.73□□□□□ -0.21
COL4A3BP-204ENST00000405807 TMEM267Q0VDI3 215 aaPredicted RBP13.73□□□□□ -0.21
COL4A3BP-204ENST00000405807 PNKDQ8N490 385 aa13.73□□□□□ -0.21
COL4A3BP-204ENST00000405807 CISD2Q8N5K1 135 aaKnown RBP13.73□□□□□ -0.21
COL4A3BP-204ENST00000405807 MBD3L1Q8WWY6 194 aa13.73□□□□□ -0.21
COL4A3BP-204ENST00000405807 RSG1Q9BU20 258 aa13.73□□□□□ -0.21
COL4A3BP-204ENST00000405807 Q9N2K0 584 aa13.73□□□□□ -0.21
COL4A3BP-204ENST00000405807 RPRMQ9NS64 109 aa13.73□□□□□ -0.21
COL4A3BP-204ENST00000405807 C19orf25Q9UFG5 118 aaPredicted RBP13.73□□□□□ -0.21
COL4A3BP-204ENST00000405807 SLC22A20A6NK97 555 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 IGLC1P0CG04 106 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 KRTDAPP60985 99 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 CEACAM21Q3KPI0 293 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 RAET1LQ5VY80 246 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 TAAR3PQ9P1P4 343 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 PIGBOS1A0A0B4J2F0 54 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 FAM90A10PA6NDY2 464 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 FAM90A18PA6NE21 464 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 FAM90A16PA6NEW6 464 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 FAM90A20PA6NIJ5 464 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 FAM90A8PA6NJQ4 464 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 FAM90A7PA6NKC0 464 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 FAM90A22PA8MWA6 464 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 FAM90A12PA8MX19 464 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 FAM90A5PA8MXJ8 464 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 FAM90A23PA8MXZ1 464 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 FAM90A15PP0C7V4 464 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 FAM90A13PP0C7W8 464 aa13.72□□□□□ -0.21
COL4A3BP-204ENST00000405807 FAM90A14PP0C7W9 464 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms