RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 WDR54Q9H977 334 aa8.44□□□□□ -1.06
HERC3-202ENST00000402738 OR51B2Q9Y5P1 312 aa8.44□□□□□ -1.06
HERC3-202ENST00000402738 ABCA3Q99758 1704 aa8.44□□□□□ -1.06
HERC3-202ENST00000402738 LMO7DNF2Z398 122 aa8.44□□□□□ -1.06
HERC3-202ENST00000402738 PPIAL4DF5H284 164 aa8.44□□□□□ -1.06
HERC3-202ENST00000402738 NDUFB3O43676 98 aa8.44□□□□□ -1.06
HERC3-202ENST00000402738 RAC3P60763 192 aa8.44□□□□□ -1.06
HERC3-202ENST00000402738 RPL31P62899 125 aaKnown RBP8.44□□□□□ -1.06
HERC3-202ENST00000402738 C9orf40Q8IXQ3 194 aa8.44□□□□□ -1.06
HERC3-202ENST00000402738 NUDT10Q8NFP7 164 aa8.44□□□□□ -1.06
HERC3-202ENST00000402738 GLRX2Q9NS18 164 aa8.44□□□□□ -1.06
HERC3-202ENST00000402738 ADCYAP1P18509 176 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 SMAGPQ0VAQ4 97 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 ZNF324BQ6AW86 544 aaPredicted RBP8.43□□□□□ -1.06
HERC3-202ENST00000402738 WFDC8Q8IUA0 241 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 GPBAR1Q8TDU6 330 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 JKAMPQ9P055 326 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 IGKV1D-42A0A075B6H8 117 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 A0A087WV48 116 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 ZNF716A6NP11 495 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 J3KRW8 73 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 ZNHIT1O43257 154 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 TNFSF14O43557 240 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 CA11O75493 328 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 LIPFP07098 398 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 SSTR5P35346 364 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 TPRX1Q8N7U7 411 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 KCNK17Q96T54 332 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 CXXC4Q9H2H0 198 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 COL18A1P39060 1754 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 PGPA6NDG6 321 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 SHISA7A6NL88 538 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 MGPP08493 103 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 MST1P26927 711 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 LRRC10Q5BKY1 277 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 UNQ5815/PRO19632Q6UWF5 114 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 VSTM2AQ8TAG5 236 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 THYN1Q9P016 225 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 LHFPL6Q9Y693 200 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 TRPM6Q9BX84 2022 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 TNFSF13O75888 250 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 ATP5G3P48201 142 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 FGF12P61328 243 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 ZP4Q12836 540 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 C1orf194Q5T5A4 169 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 ZNF664Q8N3J9 261 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 OR1L1Q8NH94 360 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 ZNF418Q8TF45 676 aaPredicted RBP8.43□□□□□ -1.06
HERC3-202ENST00000402738 APOBEC4Q8WW27 367 aaKnown RBP8.43□□□□□ -1.06
HERC3-202ENST00000402738 RPEQ96AT9 228 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 GLI3P10071 1580 aa8.43□□□□□ -1.06
HERC3-202ENST00000402738 FAM186AA6NE01 2351 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 LYZL6O75951 148 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 GCHFRP30047 84 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 TM4SF4P48230 202 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 HOXA4Q00056 320 aaPredicted RBP8.42□□□□□ -1.06
HERC3-202ENST00000402738 LINC00596Q86U02 117 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 FAM131CQ96AQ9 280 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 HARBI1Q96MB7 349 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 HSPB7Q9UBY9 170 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 OTOFQ9HC10 1997 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 SCN4AP35499 1836 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 FAM90A26D6RGX4 464 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 GZMHP20718 246 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 RASL10BQ96S79 203 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 CABIN1Q9Y6J0 2220 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 SIPA1L3O60292 1781 aaPredicted RBP8.42□□□□□ -1.06
HERC3-202ENST00000402738 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.42□□□□□ -1.06
HERC3-202ENST00000402738 MARF1Q9Y4F3 1742 aaKnown RBP8.42□□□□□ -1.06
HERC3-202ENST00000402738 SCO2A0A1W2PP80 73 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 TMEM189A5PLL7 270 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 CTSSP25774 331 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 SLC25A40Q8TBP6 338 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 RASL11BQ9BPW5 248 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 GPR35Q9HC97 309 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 AMMECR1Q9Y4X0 333 aaPredicted RBP8.42□□□□□ -1.06
HERC3-202ENST00000402738 SELENOKQ9Y6D0 94 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 TSPAN2O60636 221 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 IL4P05112 153 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 GABRG2P18507 467 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 ACSF3Q4G176 576 aaPredicted RBP8.42□□□□□ -1.06
HERC3-202ENST00000402738 AMMECR1LQ6DCA0 310 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 SIGMAR1Q99720 223 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 SF3B5Q9BWJ5 86 aaKnown RBP8.42□□□□□ -1.06
HERC3-202ENST00000402738 CYTL1Q9NRR1 136 aa8.42□□□□□ -1.06
HERC3-202ENST00000402738 ANKRD31Q8N7Z5 1873 aa8.41□□□□□ -1.06
HERC3-202ENST00000402738 K7N7A8 449 aa8.41□□□□□ -1.06
HERC3-202ENST00000402738 SRD5A2P31213 254 aa8.41□□□□□ -1.06
HERC3-202ENST00000402738 GPR6P46095 362 aaPredicted RBP8.41□□□□□ -1.06
HERC3-202ENST00000402738 ZNF83P51522 516 aa8.41□□□□□ -1.06
HERC3-202ENST00000402738 LRRC75BQ2VPJ9 315 aa8.41□□□□□ -1.06
HERC3-202ENST00000402738 C1QL2Q7Z5L3 287 aa8.41□□□□□ -1.06
HERC3-202ENST00000402738 FAM169BQ8N8A8 192 aa8.41□□□□□ -1.06
HERC3-202ENST00000402738 RRHO14718 337 aa8.41□□□□□ -1.06
HERC3-202ENST00000402738 FOXS1O43638 330 aa8.41□□□□□ -1.06
HERC3-202ENST00000402738 C1QTNF9P0C862 333 aa8.41□□□□□ -1.06
HERC3-202ENST00000402738 GPR183P32249 361 aa8.41□□□□□ -1.06
HERC3-202ENST00000402738 RNPS1Q15287 305 aaKnown RBP8.41□□□□□ -1.06
HERC3-202ENST00000402738 OR1L8Q8NGR8 309 aa8.41□□□□□ -1.06
HERC3-202ENST00000402738 TIMD4Q96H15 378 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms