RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 SLC25A53Q5H9E4 307 aa15.56■□□□□ 0.08
COL18A1-204ENST00000400337 MARCH11A6NNE9 402 aa15.56■□□□□ 0.08
COL18A1-204ENST00000400337 NDUFA2O43678 99 aa15.56■□□□□ 0.08
COL18A1-204ENST00000400337 MPDU1O75352 247 aa15.56■□□□□ 0.08
COL18A1-204ENST00000400337 PTBP3O95758 552 aaKnown RBP15.56■□□□□ 0.08
COL18A1-204ENST00000400337 PLAUP00749 431 aa15.56■□□□□ 0.08
COL18A1-204ENST00000400337 HIST1H1BP16401 226 aaKnown RBP15.56■□□□□ 0.08
COL18A1-204ENST00000400337 PRNTQ86SH4 94 aa15.56■□□□□ 0.08
COL18A1-204ENST00000400337 TAF15Q92804 592 aaKnown RBP eCLIP15.56■□□□□ 0.08
COL18A1-204ENST00000400337 SLC25A17O43808 307 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 ZNF137PP52743 207 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 ASPHD2Q6ICH7 369 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 TMEM116Q8NCL8 245 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 AQP10Q96PS8 301 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 SIGLEC5O15389 551 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 CSRP2Q16527 193 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 MMD2Q8IY49 270 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 TMEM45BQ96B21 275 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 OR4C12Q96R67 309 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 S1PR2O95136 353 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 CD40P25942 277 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 LINC00114Q6XXX2 140 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 Q6ZN92 141 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 SMDT1Q9H4I9 107 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 NDUFB4O95168 129 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 MIC13Q5XKP0 118 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 RBPMS2Q6ZRY4 209 aaKnown RBP15.55■□□□□ 0.08
COL18A1-204ENST00000400337 SGMS2Q8NHU3 365 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 LOC285556D6RIA3 1793 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 WDR90Q96KV7 1748 aa15.55■□□□□ 0.08
COL18A1-204ENST00000400337 ADAM11O75078 769 aa15.54■□□□□ 0.08
COL18A1-204ENST00000400337 TMEM191AQ9H0A3 160 aa15.54■□□□□ 0.08
COL18A1-204ENST00000400337 ZG16O60844 167 aa15.54■□□□□ 0.08
COL18A1-204ENST00000400337 FAM106CPP0CH98 169 aa15.54■□□□□ 0.08
COL18A1-204ENST00000400337 JPT1Q9UK76 154 aa15.54■□□□□ 0.08
COL18A1-204ENST00000400337 LOXL3P58215 753 aa15.54■□□□□ 0.08
COL18A1-204ENST00000400337 DGAT2L7PQ6IED9 249 aa15.54■□□□□ 0.08
COL18A1-204ENST00000400337 VWA1Q6PCB0 445 aa15.54■□□□□ 0.08
COL18A1-204ENST00000400337 OR5AU1Q8NGC0 362 aa15.54■□□□□ 0.08
COL18A1-204ENST00000400337 IMMP1LQ96LU5 166 aa15.54■□□□□ 0.08
COL18A1-204ENST00000400337 SSTR5P35346 364 aa15.54■□□□□ 0.08
COL18A1-204ENST00000400337 TNFRSF9Q07011 255 aa15.54■□□□□ 0.08
COL18A1-204ENST00000400337 SPTBN2O15020 2390 aa15.54■□□□□ 0.08
COL18A1-204ENST00000400337 PPIAL4CA0A0B4J2A2 164 aa15.54■□□□□ 0.08
COL18A1-204ENST00000400337 MFSD2BA6NFX1 497 aa15.54■□□□□ 0.08
COL18A1-204ENST00000400337 PPIAL4GP0DN37 164 aa15.54■□□□□ 0.08
COL18A1-204ENST00000400337 MDKP21741 143 aaPredicted RBP15.54■□□□□ 0.08
COL18A1-204ENST00000400337 OR4A5Q8NH83 315 aa15.54■□□□□ 0.08
COL18A1-204ENST00000400337 EAF1Q96JC9 268 aaPredicted RBP15.54■□□□□ 0.08
COL18A1-204ENST00000400337 SDHCQ99643 169 aaPredicted RBP15.54■□□□□ 0.08
COL18A1-204ENST00000400337 WNT9BO14905 357 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 SYNGR3O43761 229 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 MRPL14Q6P1L8 145 aaKnown RBP15.53■□□□□ 0.08
COL18A1-204ENST00000400337 CALHM1Q8IU99 346 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 GBGT1Q8N5D6 347 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 SNCGO76070 127 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 HSPE1P61604 102 aaKnown RBP15.53■□□□□ 0.08
COL18A1-204ENST00000400337 ARF6P62330 175 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 TMEM187Q14656 261 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 A0A087X0M5 115 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 TRBV23-1A0A0A0MS06 115 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 A0A1B0GX30 115 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 ISLRO14498 428 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 APCSP02743 223 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 VKORC1L1Q8N0U8 176 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 IFNL4K9M1U5 179 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 MELTFP08582 738 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 SMIM6P0DI80 62 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 RND2P52198 227 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 MEF2BQ02080 365 aaPredicted RBP15.53■□□□□ 0.08
COL18A1-204ENST00000400337 ABHD12Q8N2K0 398 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 BET1LQ9NYM9 111 aa15.53■□□□□ 0.08
COL18A1-204ENST00000400337 PSME4Q14997 1843 aa15.52■□□□□ 0.08
COL18A1-204ENST00000400337 hCG_38984A0A1B0GV85 526 aa15.52■□□□□ 0.08
COL18A1-204ENST00000400337 EIF3GO75821 320 aaKnown RBP eCLIP15.52■□□□□ 0.08
COL18A1-204ENST00000400337 SELENOTP62341 195 aa15.52■□□□□ 0.08
COL18A1-204ENST00000400337 CNOT1A5YKK6 2376 aaKnown RBP15.52■□□□□ 0.08
COL18A1-204ENST00000400337 FAM90A26D6RGX4 464 aa15.52■□□□□ 0.08
COL18A1-204ENST00000400337 ZNRF1Q8ND25 227 aa15.52■□□□□ 0.08
COL18A1-204ENST00000400337 FLVCR1-AS1Q8TAF5 88 aa15.52■□□□□ 0.08
COL18A1-204ENST00000400337 LHFPL5Q8TAF8 219 aa15.52■□□□□ 0.08
COL18A1-204ENST00000400337 GUCD1Q96NT3 240 aa15.52■□□□□ 0.08
COL18A1-204ENST00000400337 SCNM1Q9BWG6 230 aa15.52■□□□□ 0.08
COL18A1-204ENST00000400337 ZNF236Q9UL36 1845 aa15.52■□□□□ 0.07
COL18A1-204ENST00000400337 J3QW42 95 aa15.52■□□□□ 0.07
COL18A1-204ENST00000400337 UMODP07911 640 aa15.52■□□□□ 0.07
COL18A1-204ENST00000400337 DRAM1Q8N682 238 aa15.52■□□□□ 0.07
COL18A1-204ENST00000400337 ZNF837Q96EG3 531 aaPredicted RBP15.52■□□□□ 0.07
COL18A1-204ENST00000400337 PITPNC1Q9UKF7 332 aa15.52■□□□□ 0.07
COL18A1-204ENST00000400337 A0A0G2JK05 382 aa15.52■□□□□ 0.07
COL18A1-204ENST00000400337 CORTO00230 105 aa15.52■□□□□ 0.07
COL18A1-204ENST00000400337 RHBDL1O75783 438 aa15.52■□□□□ 0.07
COL18A1-204ENST00000400337 MGPP08493 103 aa15.52■□□□□ 0.07
COL18A1-204ENST00000400337 SLC35B1P78383 322 aa15.52■□□□□ 0.07
COL18A1-204ENST00000400337 DYNLRB2Q8TF09 96 aa15.52■□□□□ 0.07
COL18A1-204ENST00000400337 RTTNQ86VV8 2226 aa15.52■□□□□ 0.07
COL18A1-204ENST00000400337 ZNF735P0CB33 412 aa15.51■□□□□ 0.07
COL18A1-204ENST00000400337 KLK2P20151 261 aa15.51■□□□□ 0.07
COL18A1-204ENST00000400337 LRRC75BQ2VPJ9 315 aa15.51■□□□□ 0.07
COL18A1-204ENST00000400337 FADS6Q8N9I5 356 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms