RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 SPTAN1Q13813 2472 aaKnown RBP12.51□□□□□ -0.41
RPRD1A-202ENST00000399022 SAPCD1Q5SSQ6 148 aa12.51□□□□□ -0.41
RPRD1A-202ENST00000399022 WDFY1Q8IWB7 410 aa12.51□□□□□ -0.41
RPRD1A-202ENST00000399022 HES7Q9BYE0 225 aa12.51□□□□□ -0.41
RPRD1A-202ENST00000399022 TMEM106BQ9NUM4 274 aa12.51□□□□□ -0.41
RPRD1A-202ENST00000399022 SERTM2A0A1B0GWG4 89 aa12.51□□□□□ -0.41
RPRD1A-202ENST00000399022 CA11O75493 328 aa12.51□□□□□ -0.41
RPRD1A-202ENST00000399022 CD33P20138 364 aa12.51□□□□□ -0.41
RPRD1A-202ENST00000399022 MFAP2P55001 183 aa12.51□□□□□ -0.41
RPRD1A-202ENST00000399022 RNPS1Q15287 305 aaKnown RBP12.51□□□□□ -0.41
RPRD1A-202ENST00000399022 ALKBH7Q9BT30 221 aaPredicted RBP12.51□□□□□ -0.41
RPRD1A-202ENST00000399022 LCN2P80188 198 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 ZNF718Q3SXZ3 478 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 FA2HQ7L5A8 372 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 DEFB124Q8NES8 71 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 OR2M7Q8NG81 312 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 WDYHV1Q96HA8 205 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 RNF2Q99496 336 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 ZNF835Q9Y2P0 537 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 SPTBN1Q01082 2364 aaKnown RBP12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 M0R1B8 84 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 COX6A1P12074 109 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 SRIP30626 198 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 VWA1Q6PCB0 445 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 HSD17B10Q99714 261 aaKnown RBP12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 SRXN1Q9BYN0 137 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 SH2D2AQ9NP31 389 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 ZNF318Q5VUA4 2279 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 TMEM30CPA0ZSE6 113 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 OTX1P32242 354 aaPredicted RBP12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 UCP3P55916 312 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 DCAF10Q5QP82 559 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 LHFPL1Q86WI0 220 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 H1FXQ92522 213 aaKnown RBP12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 PROCRQ9UNN8 238 aa12.5□□□□□ -0.41
RPRD1A-202ENST00000399022 NPIPB7O75200 414 aa12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 OR5AL1P0C617 328 aa12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 TCF23Q7RTU1 214 aa12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 OR2D3Q8NGH3 330 aa12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 ZNF837Q96EG3 531 aaPredicted RBP12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 SNHG12Q9BXW3 62 aa12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 OR1A1Q9P1Q5 309 aa12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 LAMTOR2Q9Y2Q5 125 aa12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 GAGE10A6NGK3 116 aa12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 MMDQ15546 238 aa12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 CDCP2Q5VXM1 449 aa12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 EGLN1Q9GZT9 426 aa12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 FANCMQ8IYD8 2048 aa12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 DPRXA6NFQ7 191 aa12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 CDIPTO14735 213 aa12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 PMCHL1Q16048 86 aa12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 SFRP2Q96HF1 295 aa12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 PSMG3Q9BT73 122 aaPredicted RBP12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 QTRT1Q9BXR0 403 aaKnown RBP12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 DENND4CQ5VZ89 1909 aa12.49□□□□□ -0.41
RPRD1A-202ENST00000399022 SERF1AO75920 110 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 CXorf1O96002 111 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 IGHMP01871 453 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 RFPL3SP0C7P2 107 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 SOX8P57073 446 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 PLGLAQ15195 96 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 PRDM13Q9H4Q3 707 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 CHCHD2Q9Y6H1 151 aaPredicted RBP12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 COX7A2P2O60397 106 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 MT-ND6P03923 174 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 C1orf194Q5T5A4 169 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 DMRTC2Q8IXT2 367 aaPredicted RBP12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 NFAM1Q8NET5 270 aaPredicted RBP12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 GMPPAQ96IJ6 420 aaPredicted RBP12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 SEMA5BQ9P283 1151 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 CT45A6P0DMU7 189 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 CT45A5P0DMU8 189 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 CT45A7P0DMV0 189 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 CD1BP29016 333 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 CT45A1Q5HYN5 189 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 CT45A3Q8NHU0 189 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 MRGPRDQ8TDS7 321 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 FBLN5Q9UBX5 448 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 TBL2Q9Y4P3 447 aaKnown RBP12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 B4E171 279 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 IL3RAP26951 378 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 FXYD3Q14802 87 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 RNF144BQ7Z419 303 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 OR2Z1Q8NG97 314 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 PRSS3P2Q8NHM4 247 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 FAM122AQ96E09 287 aa12.48□□□□□ -0.41
RPRD1A-202ENST00000399022 TEX50A0A1B0GTY4 177 aa12.47□□□□□ -0.41
RPRD1A-202ENST00000399022 SELEP16581 610 aa12.47□□□□□ -0.41
RPRD1A-202ENST00000399022 GLRX2Q9NS18 164 aa12.47□□□□□ -0.41
RPRD1A-202ENST00000399022 IGKV1-9A0A0C4DH69 117 aa12.47□□□□□ -0.41
RPRD1A-202ENST00000399022 SLC17A3O00476 420 aa12.47□□□□□ -0.41
RPRD1A-202ENST00000399022 VENTXO95231 258 aa12.47□□□□□ -0.41
RPRD1A-202ENST00000399022 FGFRL1Q8N441 504 aa12.47□□□□□ -0.41
RPRD1A-202ENST00000399022 IFITM10A6NMD0 228 aa12.47□□□□□ -0.41
RPRD1A-202ENST00000399022 HTR1DP28221 377 aa12.47□□□□□ -0.41
RPRD1A-202ENST00000399022 UQCRFS1P47985 274 aa12.47□□□□□ -0.41
RPRD1A-202ENST00000399022 NPBWR2P48146 333 aa12.47□□□□□ -0.41
RPRD1A-202ENST00000399022 TCTAP57738 103 aa12.47□□□□□ -0.41
RPRD1A-202ENST00000399022 BPIFA4PQ86YQ2 179 aa12.47□□□□□ -0.41
RPRD1A-202ENST00000399022 FAM131CQ96AQ9 280 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms