RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 SLC31A2O15432 143 aa14.08□□□□□ -0.16
SCN3B-202ENST00000392770 IZUMO4Q1ZYL8 232 aa14.08□□□□□ -0.16
SCN3B-202ENST00000392770 FAM122AQ96E09 287 aa14.08□□□□□ -0.16
SCN3B-202ENST00000392770 WBP1Q96G27 269 aa14.08□□□□□ -0.16
SCN3B-202ENST00000392770 SEC16AO15027 2179 aa14.08□□□□□ -0.16
SCN3B-202ENST00000392770 ID4P47928 161 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 TPPP2P59282 170 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 ZNF385CQ66K41 422 aaPredicted RBP14.07□□□□□ -0.16
SCN3B-202ENST00000392770 OR5R1Q8NH85 324 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 RHOVQ96L33 236 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 IGKV1-9A0A0C4DH69 117 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 H3BQ15 152 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 ZG16O60844 167 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 FAM157CP0CG43 387 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 GAMTQ14353 236 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 CBLN2Q8IUK8 224 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 TRAF4Q9BUZ4 470 aaPredicted RBP14.07□□□□□ -0.16
SCN3B-202ENST00000392770 NAGKQ9UJ70 344 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 SMIM17P0DL12 118 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 SERF2P84101 59 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 FAM216AQ8WUB2 273 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 TMEM106BQ9NUM4 274 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 LOC105371242A0A075B767 164 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 FAM106CPP0CH98 169 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 SPACA3Q8IXA5 215 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 ISOC2Q96AB3 205 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 TMEM204Q9BSN7 226 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 DLL1O00548 723 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 MUC1P15941 1255 aaPredicted RBP14.07□□□□□ -0.16
SCN3B-202ENST00000392770 H1FOOQ8IZA3 346 aaPredicted RBP14.07□□□□□ -0.16
SCN3B-202ENST00000392770 SIRT7Q9NRC8 400 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 HIGD1AQ9Y241 93 aa14.07□□□□□ -0.16
SCN3B-202ENST00000392770 RPL39P5Q59GN2 51 aa14.06□□□□□ -0.16
SCN3B-202ENST00000392770 SIGIRRQ6IA17 410 aa14.06□□□□□ -0.16
SCN3B-202ENST00000392770 RTBDNQ9BSG5 229 aaPredicted RBP14.06□□□□□ -0.16
SCN3B-202ENST00000392770 RALYQ9UKM9 306 aaKnown RBP14.06□□□□□ -0.16
SCN3B-202ENST00000392770 FAM90A26D6RGX4 464 aa14.06□□□□□ -0.16
SCN3B-202ENST00000392770 FCN1O00602 326 aa14.06□□□□□ -0.16
SCN3B-202ENST00000392770 HCP5Q6MZN7 132 aa14.06□□□□□ -0.16
SCN3B-202ENST00000392770 CCL19Q99731 98 aa14.06□□□□□ -0.16
SCN3B-202ENST00000392770 C12orf77C9JDV5 145 aa14.06□□□□□ -0.16
SCN3B-202ENST00000392770 OR9G1Q8NH87 305 aa14.06□□□□□ -0.16
SCN3B-202ENST00000392770 NABP1Q96AH0 204 aa14.06□□□□□ -0.16
SCN3B-202ENST00000392770 OR10J1P30954 320 aa14.06□□□□□ -0.16
SCN3B-202ENST00000392770 ARF6P62330 175 aa14.06□□□□□ -0.16
SCN3B-202ENST00000392770 MRPL30Q8TCC3 161 aaKnown RBP14.06□□□□□ -0.16
SCN3B-202ENST00000392770 SOSTQ9BQB4 213 aa14.06□□□□□ -0.16
SCN3B-202ENST00000392770 NUP210Q8TEM1 1887 aaPredicted RBP14.06□□□□□ -0.16
SCN3B-202ENST00000392770 KIAA1324LA8MWY0 1029 aaPredicted RBP14.06□□□□□ -0.16
SCN3B-202ENST00000392770 NMBP08949 121 aa14.06□□□□□ -0.16
SCN3B-202ENST00000392770 KRTDAPP60985 99 aa14.06□□□□□ -0.16
SCN3B-202ENST00000392770 TMEM30BQ3MIR4 351 aa14.06□□□□□ -0.16
SCN3B-202ENST00000392770 OR2A4O95047 310 aa14.05□□□□□ -0.16
SCN3B-202ENST00000392770 CFDP00746 253 aaPredicted RBP14.05□□□□□ -0.16
SCN3B-202ENST00000392770 FAM222BQ8WU58 562 aa14.05□□□□□ -0.16
SCN3B-202ENST00000392770 OR2A7Q96R45 310 aa14.05□□□□□ -0.16
SCN3B-202ENST00000392770 B4DEV8 164 aa14.05□□□□□ -0.16
SCN3B-202ENST00000392770 SLC25A17O43808 307 aa14.05□□□□□ -0.16
SCN3B-202ENST00000392770 FABP4P15090 132 aa14.05□□□□□ -0.16
SCN3B-202ENST00000392770 PMCHP20382 165 aa14.05□□□□□ -0.16
SCN3B-202ENST00000392770 FAM74A3Q4VXF1 159 aa14.05□□□□□ -0.16
SCN3B-202ENST00000392770 FAM209AQ5JX71 171 aa14.05□□□□□ -0.16
SCN3B-202ENST00000392770 QTRT1Q9BXR0 403 aaKnown RBP14.05□□□□□ -0.16
SCN3B-202ENST00000392770 IGKV3D-15A0A087WSY6 115 aa14.05□□□□□ -0.16
SCN3B-202ENST00000392770 C7orf77A4D0Y5 90 aa14.05□□□□□ -0.16
SCN3B-202ENST00000392770 OR10G8Q8NGN5 311 aa14.05□□□□□ -0.16
SCN3B-202ENST00000392770 SH3BGRL3Q9H299 93 aa14.05□□□□□ -0.16
SCN3B-202ENST00000392770 STARD4Q96DR4 205 aa14.05□□□□□ -0.16
SCN3B-202ENST00000392770 TLNRD1Q9H1K6 362 aa14.05□□□□□ -0.16
SCN3B-202ENST00000392770 C1QL1O75973 258 aa14.04□□□□□ -0.16
SCN3B-202ENST00000392770 CRYGSP22914 178 aa14.04□□□□□ -0.16
SCN3B-202ENST00000392770 SNRPEP62304 92 aaKnown RBP14.04□□□□□ -0.16
SCN3B-202ENST00000392770 IFITM2Q01629 132 aa14.04□□□□□ -0.16
SCN3B-202ENST00000392770 OR13A1Q8NGR1 328 aa14.04□□□□□ -0.16
SCN3B-202ENST00000392770 ARL2-SNX15V9GYD0 113 aa14.04□□□□□ -0.16
SCN3B-202ENST00000392770 HELTA6NFD8 242 aa14.04□□□□□ -0.16
SCN3B-202ENST00000392770 BTCP35070 178 aa14.04□□□□□ -0.16
SCN3B-202ENST00000392770 DHRS7BQ6IAN0 325 aaPredicted RBP14.04□□□□□ -0.16
SCN3B-202ENST00000392770 TMEM186Q96B77 213 aa14.04□□□□□ -0.16
SCN3B-202ENST00000392770 NOL4LQ96MY1 436 aaPredicted RBP14.04□□□□□ -0.16
SCN3B-202ENST00000392770 CLEC7AQ9BXN2 247 aa14.04□□□□□ -0.16
SCN3B-202ENST00000392770 CD8AP01732 235 aa14.04□□□□□ -0.16
SCN3B-202ENST00000392770 MMD2Q8IY49 270 aa14.04□□□□□ -0.16
SCN3B-202ENST00000392770 PAXXQ9BUH6 204 aa14.04□□□□□ -0.16
SCN3B-202ENST00000392770 MMP7P09237 267 aaPredicted RBP14.04□□□□□ -0.16
SCN3B-202ENST00000392770 BCL2P10415 239 aa14.04□□□□□ -0.16
SCN3B-202ENST00000392770 DPF1Q92782 380 aa14.04□□□□□ -0.16
SCN3B-202ENST00000392770 TAF15Q92804 592 aaKnown RBP eCLIP14.04□□□□□ -0.16
SCN3B-202ENST00000392770 ARHGEF17Q96PE2 2063 aaPredicted RBP14.04□□□□□ -0.16
SCN3B-202ENST00000392770 PTPRZ1P23471 2315 aaPredicted RBP14.04□□□□□ -0.16
SCN3B-202ENST00000392770 RNASEKQ6P5S7 137 aaKnown RBP14.04□□□□□ -0.16
SCN3B-202ENST00000392770 HTR1DP28221 377 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 HIST1H3AP68431 136 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 PNKDQ8N490 385 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 FAM216BQ8N7L0 139 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 TCL1AP56279 114 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 HSPE1P61604 102 aaKnown RBP14.03□□□□□ -0.16
SCN3B-202ENST00000392770 FA2HQ7L5A8 372 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 P2RX4Q99571 388 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 C12orf57Q99622 126 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms