RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 RFESDQ8TAC1 157 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 PTPMT1Q8WUK0 201 aaPredicted RBP12.85□□□□□ -0.35
CCDC50-201ENST00000392455 SPSB4Q96A44 273 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 SLC25A15Q9Y619 301 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 PRF1P14222 555 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 HAPLN4Q86UW8 402 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 PXMP4Q9Y6I8 212 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 PAPPA2Q9BXP8 1791 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 PRSS12P56730 875 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 TMEM95Q3KNT9 176 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 RPL8P62917 257 aaKnown RBP12.85□□□□□ -0.35
CCDC50-201ENST00000392455 QTRT1Q9BXR0 403 aaKnown RBP12.85□□□□□ -0.35
CCDC50-201ENST00000392455 KCNE1BA0A087WTH5 132 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 PLPP3O14495 311 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 NAPSAO96009 420 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 WNT1P04628 370 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 HDHD3Q9BSH5 251 aaPredicted RBP12.85□□□□□ -0.35
CCDC50-201ENST00000392455 SHANK1Q9Y566 2161 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 TRBV5-4A0A0C4DH59 114 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 CEACAM4O75871 244 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 CRYBB2P43320 205 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 APOBEC4Q8WW27 367 aaKnown RBP12.85□□□□□ -0.35
CCDC50-201ENST00000392455 PGLYRP3Q96LB9 341 aa12.85□□□□□ -0.35
CCDC50-201ENST00000392455 TRAV8-2A0A0B4J237 113 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 MT-CO3P00414 261 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 TMEM50BP56557 158 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 GUCA2BQ16661 112 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 TMEM170BQ5T4T1 132 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 DNM1P46Q6ZS02 220 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 MRGPRFQ96AM1 343 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 TMEM30AQ9NV96 361 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 BCORQ6W2J9 1755 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 ZNF146Q15072 292 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 J3QT63 122 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 TMEM249Q2WGJ8 235 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 OR51G1Q8NGK1 321 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 DNAJC4Q9NNZ3 241 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 RPL27AP46776 148 aaKnown RBP12.84□□□□□ -0.35
CCDC50-201ENST00000392455 ZNF562Q6V9R5 426 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 PKDREJQ9NTG1 2253 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 NKX2-2O95096 273 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 CCL2P13500 99 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 FAM57AQ8TBR7 257 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 EEF1AKMT3Q96AZ1 226 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 RPL34P49207 117 aaKnown RBP12.84□□□□□ -0.35
CCDC50-201ENST00000392455 ZNF117Q03924 483 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 ISXQ2M1V0 245 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 ZNF645Q8N7E2 425 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 ALX4Q9H161 411 aaPredicted RBP12.84□□□□□ -0.35
CCDC50-201ENST00000392455 CCL27Q9Y4X3 112 aa12.84□□□□□ -0.35
CCDC50-201ENST00000392455 COL22A1Q8NFW1 1626 aaPredicted RBP12.84□□□□□ -0.35
CCDC50-201ENST00000392455 TRAV21A0A0B4J279 112 aa12.83□□□□□ -0.35
CCDC50-201ENST00000392455 CA1P00915 261 aaPredicted RBP12.83□□□□□ -0.35
CCDC50-201ENST00000392455 GAPTQ8N292 157 aa12.83□□□□□ -0.35
CCDC50-201ENST00000392455 DNAJC30Q96LL9 226 aa12.83□□□□□ -0.35
CCDC50-201ENST00000392455 SBK3P0C264 359 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 ZFAND6Q6FIF0 208 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 ASB10Q8WXI3 467 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 DMRTA2Q96SC8 542 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 PLA2G2FQ9BZM2 168 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 CHST5Q9GZS9 411 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 ZNF71Q9NQZ8 489 aaPredicted RBP12.83□□□□□ -0.36
CCDC50-201ENST00000392455 IGKV3-7A0A075B6H7 116 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 IGHV5-51A0A0C4DH38 117 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 TMPRSS3P57727 454 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 ZNF385CQ66K41 422 aaPredicted RBP12.83□□□□□ -0.36
CCDC50-201ENST00000392455 ZNF600Q6ZNG1 722 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 PRSS27Q9BQR3 290 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 J3KRW8 73 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 CTSVO60911 334 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 NXPH1P58417 271 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 HIST1H2BAQ96A08 127 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 PLXNB2O15031 1838 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 NPIPB8E9PQR5 432 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 NPIPB9F8W1W9 429 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 NPIPB7O75200 414 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 VENTXO95231 258 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 ZNF793Q6ZN11 406 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 CLDND2Q8NHS1 167 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 DPH3P1Q9H4G8 78 aa12.83□□□□□ -0.36
CCDC50-201ENST00000392455 CXCL10P02778 98 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 AGAP20933 346 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 PIMREGQ9BSJ6 248 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 CXorf66Q5JRM2 361 aaPredicted RBP12.82□□□□□ -0.36
CCDC50-201ENST00000392455 SH2D5Q6ZV89 423 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 SMOC1Q9H4F8 434 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 KIAA1551Q9HCM1 1747 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.82□□□□□ -0.363e-6■■■■□ 19.5
CCDC50-201ENST00000392455 IGHV3-43A0A0B4J1X8 118 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 DPRXA6NFQ7 191 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 IGHV3-43DP0DP04 118 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 TNRC6CQ9HCJ0 1690 aaKnown RBP12.82□□□□□ -0.36
CCDC50-201ENST00000392455 C5orf30Q96GV9 206 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 SIGMAR1Q99720 223 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 SLC6A13Q9NSD5 602 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 EGR1P18146 543 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 ATP5G2Q06055 141 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 RNFT1Q5M7Z0 435 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 ISOC2Q96AB3 205 aa12.82□□□□□ -0.36
CCDC50-201ENST00000392455 CLDN16Q9Y5I7 305 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms