RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 DEPPQ9NTK1 212 aa11.12□□□□□ -0.63
PTPRN2-203ENST00000389418 RCC2Q9P258 522 aaKnown RBP11.12□□□□□ -0.63
PTPRN2-203ENST00000389418 FOXH1O75593 365 aa11.12□□□□□ -0.63
PTPRN2-203ENST00000389418 CXorf1O96002 111 aa11.12□□□□□ -0.63
PTPRN2-203ENST00000389418 SCTP09683 121 aa11.12□□□□□ -0.63
PTPRN2-203ENST00000389418 HIST1H1EP10412 219 aaKnown RBP11.12□□□□□ -0.63
PTPRN2-203ENST00000389418 NPBWR2P48146 333 aa11.12□□□□□ -0.63
PTPRN2-203ENST00000389418 RNF212Q495C1 297 aa11.12□□□□□ -0.63
PTPRN2-203ENST00000389418 MUC15Q8N387 334 aa11.12□□□□□ -0.63
PTPRN2-203ENST00000389418 SSMEM1Q8WWF3 244 aa11.12□□□□□ -0.63
PTPRN2-203ENST00000389418 TMEM186Q96B77 213 aa11.12□□□□□ -0.63
PTPRN2-203ENST00000389418 TXNDC17Q9BRA2 123 aa11.12□□□□□ -0.63
PTPRN2-203ENST00000389418 PSG5Q15238 335 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 C17orf82Q86X59 251 aaPredicted RBP11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 FAM24BQ8N5W8 94 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 TRAPPC1Q9Y5R8 145 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 ATP5J2P56134 94 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 BSXQ3C1V8 233 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 KLHDC3Q9BQ90 382 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 TRAF4Q9BUZ4 470 aaPredicted RBP11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 IGHV1-69-2A0A0G2JMI3 117 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 IGSF23A1L1A6 192 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 ZNF716A6NP11 495 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 TMEM14DPA8MWL7 114 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 PITX3O75364 302 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 GALR1P47211 349 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 UCP3P55916 312 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 ZNF705AQ6ZN79 300 aaPredicted RBP11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 ANAPC16Q96DE5 110 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 LINC00052Q96N35 136 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 PARP11Q9NR21 331 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 TP53BP1Q12888 1972 aaPredicted RBP11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 C11orf94C9JXX5 98 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 KLF7O75840 302 aaPredicted RBP11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 LIPFP07098 398 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 RPL8P62917 257 aaKnown RBP11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 OR4P4Q8NGL7 312 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 NAT8BQ9UHF3 227 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 TNFSF18Q9UNG2 199 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 GOLT1BQ9Y3E0 138 aa11.11□□□□□ -0.63
PTPRN2-203ENST00000389418 WNT9BO14905 357 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 SMAD7O15105 426 aaKnown RBP11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 CFDP00746 253 aaPredicted RBP11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 ORM1P02763 201 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 ID1P41134 155 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 GFRA1P56159 465 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 ACSF3Q4G176 576 aaPredicted RBP11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 SSX7Q7RTT5 188 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 OR5P3Q8WZ94 311 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 HIVEP3Q5T1R4 2406 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 SLC31A2O15432 143 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 RPEL1Q2QD12 228 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 DNM1P46Q6ZS02 220 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 NEU4Q8WWR8 484 aaPredicted RBP11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 RGP1Q92546 391 aaPredicted RBP11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 WDR81Q562E7 1941 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 PPIAL4CA0A0B4J2A2 164 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 TMEM218A2RU14 115 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 OR2T8A6NH00 312 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 EIF3GO75821 320 aaKnown RBP eCLIP11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 PGA5P0DJD9 388 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 PPIAL4GP0DN37 164 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 USF1P22415 310 aaPredicted RBP11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 CD1BP29016 333 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 RANP62826 216 aaKnown RBP11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 SLC35E4Q6ICL7 350 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 TOLLIPQ9H0E2 274 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 MYO9AB2RTY4 2548 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 NAV3Q8IVL0 2385 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 TLN1Q9Y490 2541 aaKnown RBP11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 HYPMO75409 117 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 CXCL2P19875 107 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 TMEM37Q8WXS4 190 aa11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 EAF1Q96JC9 268 aaPredicted RBP11.1□□□□□ -0.63
PTPRN2-203ENST00000389418 CELA3BP08861 270 aa11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 IZUMO4Q1ZYL8 232 aa11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 PCSK4Q6UW60 755 aa11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 SPACA3Q8IXA5 215 aa11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 ZNRF1Q8ND25 227 aa11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 NPDC1Q9NQX5 325 aaPredicted RBP11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 SPTBN4Q9H254 2564 aa11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 ANKHD1Q8IWZ3 2542 aaKnown RBP11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 SNCGO76070 127 aa11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 RPL30P62888 115 aaKnown RBP11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 IFT22Q9H7X7 185 aa11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 IGHV3-35A0A0C4DH35 117 aa11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 A0A1W2PS18 150 aa11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 PINLYPA6NC86 204 aa11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 NHLH2Q02577 135 aa11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 STPG3Q8N7X2 389 aa11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 OR10G8Q8NGN5 311 aa11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 A0A087WV48 116 aa11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 ZNF273Q14593 569 aa11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 ZNF362Q5T0B9 420 aaPredicted RBP11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 FAM90A1Q86YD7 464 aa11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 H1FOOQ8IZA3 346 aaPredicted RBP11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 SDHCQ99643 169 aaPredicted RBP11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 SEC11CQ9BY50 192 aa11.09□□□□□ -0.63
PTPRN2-203ENST00000389418 FAM74A7A6NL05 159 aa11.08□□□□□ -0.64
PTPRN2-203ENST00000389418 DYNLRB2Q8TF09 96 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms