RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 OR52B4Q8NGK2 314 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR11L1Q8NGX0 322 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR10D3Q8NH80 312 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR10G6Q8NH81 332 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 CNIH3Q8TBE1 160 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 ZCRB1Q8TBF4 217 aaKnown RBP-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 ST7LQ8TDW4 575 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 RPL3LQ92901 407 aaKnown RBP-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 GLYATL1Q969I3 302 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 RERGQ96A58 199 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 TM4SF18Q96CE8 201 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 DDIT4LQ96D03 193 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 SAT2Q96F10 170 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 RMND5BQ96G75 393 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 HBEGFQ99075 208 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 FERMT1Q9BQL6 677 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR51B6Q9H340 312 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 SMARCAD1Q9H4L7 1026 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 DBNDD1Q9H9R9 158 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 NMNAT1Q9HAN9 279 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 TMEM27Q9HBJ8 222 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 EURLQ9NYK6 297 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 PACSIN2Q9UNF0 486 aaPredicted RBP-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 NDUFAF1Q9Y375 327 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 PXMP4Q9Y6I8 212 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 AP1M2Q9Y6Q5 423 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 EIF4G3O43432 1585 aaKnown RBP-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 CEP170Q5SW79 1584 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 PEG3Q9GZU2 1588 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 NEO1Q92859 1461 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 RGPD2P0DJD1 1756 aa-1.95□□□□□ -2.72
RNU6-540P-201ENST00000384622 ARHGEF11O15085 1522 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 WDR62O43379 1518 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 RAB3GAP2Q9H2M9 1393 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 IBTKQ9P2D0 1353 aaPredicted RBP-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 NPHP4O75161 1426 aaPredicted RBP-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 TMSB15BA0A087X1C1 80 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 ANKRD62A6NC57 917 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR4C46A6NHA9 309 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 FAM183AA6NL82 134 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 M0QX08 132 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 CLDN4O14493 209 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 SC5DO75845 299 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 SLC22A5O76082 557 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 NSA2O95478 260 aaKnown RBP-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 ACYP1P07311 99 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 SULT1A3P0DMM9 295 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 SULT1A4P0DMN0 295 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 CTLA4P16410 223 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 CNR1P21554 472 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 AZGP1P25311 298 aaKnown RBP-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 YWHABP31946 246 aaKnown RBP-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 CD151P48509 253 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 ACLYP53396 1101 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 TCL1AP56279 114 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 CLDN18P56856 261 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 TAS2R20P59543 309 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 SELENOTP62341 195 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 MRPS15P82914 257 aaKnown RBP-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 MC1RQ01726 317 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 PDIA2Q13087 525 aaKnown RBP-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 PDZK1IP1Q13113 114 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 PDIA5Q14554 519 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 TAF1AQ15573 450 aaPredicted RBP-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 STXBP2Q15833 593 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 MAPK14Q16539 360 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 SLC25A52Q3SY17 297 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 IFI44LQ53G44 452 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 SPIN4Q56A73 249 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 NKAIN2Q5VXU1 208 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 MED27Q6P2C8 311 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 OPN5Q6U736 354 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 SCGB1D4Q6XE38 83 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 ZNF705AQ6ZN79 300 aaPredicted RBP-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 SZRD1Q7Z422 152 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 PHF13Q86YI8 300 aaPredicted RBP-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 FAM58AQ8N1B3 248 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 CENPSQ8N2Z9 138 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 PACRGLQ8N7B6 248 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 PDILTQ8N807 584 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 Q8N8P6 123 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 STKLD1Q8NE28 680 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR13D1Q8NGV5 346 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 OR4S2Q8NH73 311 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 NUBPLQ8TB37 319 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 SLC2A14Q8TDB8 520 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 PYROXD1Q8WU10 500 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 CCDC124Q96CT7 223 aaKnown RBP-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 OPTNQ96CV9 577 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 TBC1D31Q96DN5 1066 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 CABS1Q96KC9 395 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 NLNQ9BYT8 704 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 TM6SF2Q9BZW4 377 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 TMEM14BQ9NUH8 114 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 SDAD1Q9NVU7 687 aaKnown RBP eCLIP-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 GDE1Q9NZC3 331 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 HIGD1BQ9P298 99 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 TRIM10Q9UDY6 481 aa-1.96□□□□□ -2.72
RNU6-540P-201ENST00000384622 TRMT112Q9UI30 125 aaKnown RBP-1.96□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms