RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 GPR87Q9BY21 358 aa12.94□□□□□ -0.34
RER1-203ENST00000378513 TMEM9BQ9NQ34 198 aa12.94□□□□□ -0.34
RER1-203ENST00000378513 A0A1W2PPQ1 181 aa12.93□□□□□ -0.34
RER1-203ENST00000378513 MLNRO43193 412 aa12.93□□□□□ -0.34
RER1-203ENST00000378513 ZG16O60844 167 aa12.93□□□□□ -0.34
RER1-203ENST00000378513 DFFBO76075 338 aa12.93□□□□□ -0.34
RER1-203ENST00000378513 TAS2R60P59551 318 aa12.93□□□□□ -0.34
RER1-203ENST00000378513 SLC38A11Q08AI6 406 aa12.93□□□□□ -0.34
RER1-203ENST00000378513 KLF14Q8TD94 323 aaPredicted RBP12.93□□□□□ -0.34
RER1-203ENST00000378513 ZPBPQ9BS86 351 aa12.93□□□□□ -0.34
RER1-203ENST00000378513 MAP1LC3B2A6NCE7 125 aa12.93□□□□□ -0.34
RER1-203ENST00000378513 TFF3Q07654 80 aa12.93□□□□□ -0.34
RER1-203ENST00000378513 VKORC1L1Q8N0U8 176 aa12.93□□□□□ -0.34
RER1-203ENST00000378513 RPP25LQ8N5L8 163 aaKnown RBP12.93□□□□□ -0.34
RER1-203ENST00000378513 MAP1LC3BQ9GZQ8 125 aa12.93□□□□□ -0.34
RER1-203ENST00000378513 PTPRZ1P23471 2315 aaPredicted RBP12.93□□□□□ -0.34
RER1-203ENST00000378513 COL27A1Q8IZC6 1860 aaPredicted RBP12.92□□□□□ -0.34
RER1-203ENST00000378513 SH2D1BO14796 132 aa12.92□□□□□ -0.34
RER1-203ENST00000378513 EREGO14944 169 aa12.92□□□□□ -0.34
RER1-203ENST00000378513 HSPB1P04792 205 aaKnown RBP12.92□□□□□ -0.34
RER1-203ENST00000378513 BCL2P10415 239 aa12.92□□□□□ -0.34
RER1-203ENST00000378513 MDH2P40926 338 aaKnown RBP12.92□□□□□ -0.34
RER1-203ENST00000378513 LHX4Q969G2 390 aa12.92□□□□□ -0.34
RER1-203ENST00000378513 XKRY2A2RUG3 117 aa12.92□□□□□ -0.34
RER1-203ENST00000378513 CLDN34H7C241 214 aa12.92□□□□□ -0.34
RER1-203ENST00000378513 HBZP02008 142 aa12.92□□□□□ -0.34
RER1-203ENST00000378513 FOXF2Q12947 444 aa12.92□□□□□ -0.34
RER1-203ENST00000378513 PRSS8Q16651 343 aa12.92□□□□□ -0.34
RER1-203ENST00000378513 ACSM6Q6P461 480 aa12.92□□□□□ -0.34
RER1-203ENST00000378513 ZNF66Q6ZN08 573 aa12.92□□□□□ -0.34
RER1-203ENST00000378513 MRPL41Q8IXM3 137 aaKnown RBP12.92□□□□□ -0.34
RER1-203ENST00000378513 AKAP13Q12802 2813 aa12.92□□□□□ -0.34
RER1-203ENST00000378513 KMT2EQ8IZD2 1858 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.91□□□□□ -0.34
RER1-203ENST00000378513 COL10A1Q03692 680 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 GCSAMLQ5JQS6 135 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 ZNF664Q8N3J9 261 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 KDF1Q8NAX2 398 aaPredicted RBP12.91□□□□□ -0.34
RER1-203ENST00000378513 PKIBQ9C010 78 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 CBLN4Q9NTU7 201 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 PSG11Q9UQ72 335 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 DUXBA0A1W2PPF3 345 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 ODAMA1E959 279 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 LRP5LA4QPB2 252 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 BRWD1-AS2P59051 145 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 UTF1Q5T230 341 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 NANOS1Q8WY41 292 aaKnown RBP12.91□□□□□ -0.34
RER1-203ENST00000378513 ELOVL1Q9BW60 279 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 LIN7CQ9NUP9 197 aaKnown RBP12.91□□□□□ -0.34
RER1-203ENST00000378513 SP9P0CG40 484 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 PMS2P11Q13670 270 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 BATFQ16520 125 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 SRSF7Q16629 238 aaKnown RBP eCLIP12.91□□□□□ -0.34
RER1-203ENST00000378513 OR4X1Q8NH49 305 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 LEAP2Q969E1 77 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 IL22RA2Q969J5 263 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 WDR61Q9GZS3 305 aaKnown RBP12.91□□□□□ -0.34
RER1-203ENST00000378513 SLC39A9Q9NUM3 307 aa12.91□□□□□ -0.34
RER1-203ENST00000378513 OTOGLQ3ZCN5 2332 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 IGHV3OR15-7A0A075B7D8 119 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 A0A1B0GW64 132 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 C21orf140B9A014 251 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 ERVK11-1P61568 191 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 SP5Q6BEB4 398 aaPredicted RBP12.9□□□□□ -0.34
RER1-203ENST00000378513 OR13A1Q8NGR1 328 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 TAF15Q92804 592 aaKnown RBP eCLIP12.9□□□□□ -0.348e-7■■□□□ 11.8
RER1-203ENST00000378513 COQ2Q96H96 371 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 TMEM204Q9BSN7 226 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 LINC00473A8K010 186 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 ZNF737O75373 536 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 HBE1P02100 147 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 AMBPP02760 352 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 CEACAM1P13688 526 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 TNFRSF9Q07011 255 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 LRRC75BQ2VPJ9 315 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 DBX2Q6ZNG2 339 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 GALMQ96C23 342 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 SMIM7Q9BQ49 75 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 KCNIP1Q9NZI2 227 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 DUSP13Q9UII6 198 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 POLDIP2Q9Y2S7 368 aa12.9□□□□□ -0.34
RER1-203ENST00000378513 ELOA3CA0A087WX78 387 aaPredicted RBP12.89□□□□□ -0.35
RER1-203ENST00000378513 A0A0U1RQK1 487 aa12.89□□□□□ -0.35
RER1-203ENST00000378513 TIMM8AO60220 97 aaPredicted RBP12.89□□□□□ -0.35
RER1-203ENST00000378513 SCGB1D1O95968 90 aa12.89□□□□□ -0.35
RER1-203ENST00000378513 GZMBP10144 247 aa12.89□□□□□ -0.35
RER1-203ENST00000378513 HBG1P69891 147 aa12.89□□□□□ -0.35
RER1-203ENST00000378513 HBG2P69892 147 aa12.89□□□□□ -0.35
RER1-203ENST00000378513 VHLLQ6RSH7 139 aa12.89□□□□□ -0.35
RER1-203ENST00000378513 A0A1B0GUS0 222 aa12.89□□□□□ -0.35
RER1-203ENST00000378513 CD33P20138 364 aa12.89□□□□□ -0.35
RER1-203ENST00000378513 UBE2G2P60604 165 aa12.89□□□□□ -0.35
RER1-203ENST00000378513 SPRNQ5BIV9 151 aa12.89□□□□□ -0.35
RER1-203ENST00000378513 FAM201AQ5SY85 155 aa12.89□□□□□ -0.35
RER1-203ENST00000378513 C16orf82Q7Z2V1 217 aa12.89□□□□□ -0.35
RER1-203ENST00000378513 FDCSPQ8NFU4 85 aa12.89□□□□□ -0.35
RER1-203ENST00000378513 FUT9Q9Y231 359 aa12.89□□□□□ -0.35
RER1-203ENST00000378513 TRBV6-6A0A0A6YYG2 114 aa12.88□□□□□ -0.35
RER1-203ENST00000378513 CRYAAP02489 173 aa12.88□□□□□ -0.35
RER1-203ENST00000378513 OR4A8P0C604 315 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms