RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 RPL23P62829 140 aaKnown RBP7.5□□□□□ -1.21
PCDH9-202ENST00000377865 NHLH1Q02575 133 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 PCOLCEQ15113 449 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 GCSAMQ8N6F7 178 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 PRSS3P2Q8NHM4 247 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 AAMDCQ9H7C9 122 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 PLA2G3Q9NZ20 509 aa7.5□□□□□ -1.21
PCDH9-202ENST00000377865 RNF224P0DH78 156 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 ID3Q02535 119 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 AESQ08117 197 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 DMWDQ09019 674 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 SPINK14Q6IE38 97 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 PQLC2Q6ZP29 291 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 OR8I2Q8N0Y5 310 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 SPRY3O43610 288 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 CHRNB4P30926 498 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 KLF3P57682 345 aaPredicted RBP7.49□□□□□ -1.21
PCDH9-202ENST00000377865 DEFB108BQ8NET1 73 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 SEBOXQ9HB31 216 aaPredicted RBP7.49□□□□□ -1.21
PCDH9-202ENST00000377865 TRAV39A0A0B4J263 110 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 TRAV38-1A0A0B4J264 116 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 NDUFB3O43676 98 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 ZG16O60844 167 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 MAGEA5P43359 124 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 DRAM1Q8N682 238 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 ZNF784Q8NCA9 323 aaPredicted RBP7.49□□□□□ -1.21
PCDH9-202ENST00000377865 HIST1H2BLQ99880 126 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 MIEN1Q9BRT3 115 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 AGMATQ9BSE5 352 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 CHCHD2Q9Y6H1 151 aaPredicted RBP7.49□□□□□ -1.21
PCDH9-202ENST00000377865 C21orf140B9A014 251 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 CXCL1P09341 107 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 COX6A1P12074 109 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 LEMD1Q68G75 181 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 ATP5IP56385 69 aaPredicted RBP7.49□□□□□ -1.21
PCDH9-202ENST00000377865 HERPUD1Q15011 391 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 ALKBH6Q3KRA9 238 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 MISP3Q96FF7 219 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 ATG101Q9BSB4 218 aa7.49□□□□□ -1.21
PCDH9-202ENST00000377865 A0A1W2PR80 420 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 B4E171 279 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 TSPAN7P41732 249 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 SLC35E4Q6ICL7 350 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 BLNKQ8WV28 456 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 MRPL32Q9BYC8 188 aaKnown RBP7.48□□□□□ -1.21
PCDH9-202ENST00000377865 TINAGQ9UJW2 476 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 LYZL6O75951 148 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 S1PR2O95136 353 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 OR5AL1P0C617 328 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 BPIFA4PQ86YQ2 179 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 BEND2Q8NDZ0 799 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 Q56UQ5 140 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 C12orf54Q6X4T0 127 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 MMD2Q8IY49 270 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 PLPPR2Q96GM1 343 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 PMCHL2Q9BQD1 86 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 PAXXQ9BUH6 204 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 ABHD14AQ9BUJ0 271 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 RTN4RQ9BZR6 473 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 JPT1Q9UK76 154 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 LINC00271P0C7V0 271 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 GCHFRP30047 84 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 CCL20P78556 96 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 P2RY6Q15077 328 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 BHLHA15Q7RTS1 189 aaPredicted RBP7.48□□□□□ -1.21
PCDH9-202ENST00000377865 VASH2Q86V25 355 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 FAM131CQ96AQ9 280 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 VWCEQ96DN2 955 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 TTTY12Q9BZ98 90 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 SCN5AQ14524 2016 aa7.48□□□□□ -1.21
PCDH9-202ENST00000377865 IGLV3-12A0A075B6K2 115 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 J3QR06 171 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 MGST3O14880 152 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 TNFSF15O95150 251 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 ZNF124Q15973 351 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 TMEM30BQ3MIR4 351 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 MIC13Q5XKP0 118 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 OR1L8Q8NGR8 309 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 OR1L1Q8NH94 360 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 KCNS1Q96KK3 526 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 C2orf88Q9BSF0 95 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 DOCK6Q96HP0 2047 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 IGKV1D-8A0A087WSZ0 117 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 MARCH11A6NNE9 402 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 K7ERU9 68 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 TNFAIP6P98066 277 aaPredicted RBP7.47□□□□□ -1.21
PCDH9-202ENST00000377865 C21orf62-AS1Q17RA5 79 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 OR1B1Q8NGR6 318 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 GPHA2Q96T91 129 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 PARD6GQ9BYG4 376 aaPredicted RBP7.47□□□□□ -1.21
PCDH9-202ENST00000377865 FZR1Q9UM11 496 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 SOD3P08294 240 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 FOXL2P58012 376 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 TMEM251Q8N6I4 163 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 DMRTA2Q96SC8 542 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 SPSB2Q99619 263 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 OR2J1Q9GZK6 312 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 PPP1R14DQ9NXH3 145 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 CLEC1BQ9P126 229 aa7.47□□□□□ -1.21
PCDH9-202ENST00000377865 WASHC3Q9Y3C0 194 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms