RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 UFSP2Q9NUQ7 469 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 DOK5Q9P104 306 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 DKK4Q9UBT3 224 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 URGCP-MRPS24S4R325 110 aa9.8□□□□□ -0.84
TNFRSF9-201ENST00000377507 KIAA2026Q5HYC2 2103 aa9.79□□□□□ -0.84
TNFRSF9-201ENST00000377507 TRBV24-1A0A075B6N3 115 aa9.79□□□□□ -0.84
TNFRSF9-201ENST00000377507 IFITM10A6NMD0 228 aa9.79□□□□□ -0.84
TNFRSF9-201ENST00000377507 FAM90A9PA6NNJ1 464 aa9.79□□□□□ -0.84
TNFRSF9-201ENST00000377507 CEBPZOSA8MTT3 80 aa9.79□□□□□ -0.84
TNFRSF9-201ENST00000377507 TMEM250H0YL14 139 aa9.79□□□□□ -0.84
TNFRSF9-201ENST00000377507 TGOLN2O43493 480 aa9.79□□□□□ -0.84
TNFRSF9-201ENST00000377507 PROP1O75360 226 aa9.79□□□□□ -0.84
TNFRSF9-201ENST00000377507 PRDX2P32119 198 aa9.79□□□□□ -0.84
TNFRSF9-201ENST00000377507 MEF2BQ02080 365 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF9-201ENST00000377507 ZNF674Q2M3X9 581 aa9.79□□□□□ -0.84
TNFRSF9-201ENST00000377507 BTNL3Q6UXE8 466 aa9.79□□□□□ -0.84
TNFRSF9-201ENST00000377507 BEND4Q6ZU67 534 aa9.79□□□□□ -0.84
TNFRSF9-201ENST00000377507 FAM90A1Q86YD7 464 aa9.79□□□□□ -0.84
TNFRSF9-201ENST00000377507 STARD4Q96DR4 205 aa9.79□□□□□ -0.84
TNFRSF9-201ENST00000377507 OR51M1Q9H341 326 aa9.79□□□□□ -0.84
TNFRSF9-201ENST00000377507 GTF3C1Q12789 2109 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 SRRM5B3KS81 715 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 PHOX2AO14813 284 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 CYB5BO43169 146 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 SPINT2O43291 252 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 HIST1H2BKO60814 126 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 LY86O95711 162 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 HIST1H2BJP06899 126 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 FABP1P07148 127 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 WT1P19544 449 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 GZMHP20718 246 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 HIST1H2BOP23527 126 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 HIST1H2BBP33778 126 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 HIST1H2BDP58876 126 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 HIST1H2BCP62807 126 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 HIST2H2BEQ16778 126 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 NCMAPQ5T1S8 102 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 CYP2G1PQ6ZSU1 146 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 TPRX1Q8N7U7 411 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 LRRC29Q8WV35 223 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 HIST1H2BHQ93079 126 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 ZDHHC16Q969W1 377 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 FAM210BQ96KR6 192 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 DIRC2Q96SL1 478 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 HIST1H2BNQ99877 126 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 HIST1H2BMQ99879 126 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 NPCDR1Q9BY65 106 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 NIT2Q9NQR4 276 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 NAT8Q9UHE5 227 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 NCOR1O75376 2440 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 MARCH11A6NNE9 402 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 ST8SIA5O15466 376 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 OPN1MWP04001 364 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 OPN1MW2P0DN77 364 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 OPN1MW3P0DN78 364 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 FGF7P21781 194 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 DUTP33316 252 aaKnown RBP9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 PDLIM3Q53GG5 364 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 C1orf87Q8N0U7 546 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 Q8N7P7 452 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 OR10G9Q8NGN4 311 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 OR10G7Q8NGN6 311 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 RFESDQ8TAC1 157 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 EDARADDQ8WWZ3 215 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 FZR1Q9UM11 496 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 PSG11Q9UQ72 335 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 SLC25A15Q9Y619 301 aa9.78□□□□□ -0.84
TNFRSF9-201ENST00000377507 CACNA1GO43497 2377 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 IGKV1D-17A0A075B6S4 117 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 C15orf62A8K5M9 175 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 YPEL1O60688 119 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 CEACAM4O75871 244 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 KBTBD11O94819 623 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 YIF1AO95070 293 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 TRGC2P03986 189 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 EGR1P18146 543 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 LINC00205P59089 165 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 TMEM249Q2WGJ8 235 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 MORN2Q502X0 79 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 NCR3LG1Q68D85 454 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 SEM1Q6ZVN7 128 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 BHLHA15Q7RTS1 189 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 YPEL2Q96QA6 119 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 PYGO2Q9BRQ0 406 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 DCTN5Q9BTE1 182 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 ACTR3CQ9C0K3 210 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 MANBALQ9NQG1 85 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 JPT1Q9UK76 154 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 PROCRQ9UNN8 238 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 WASF3Q9UPY6 502 aa9.77□□□□□ -0.85
TNFRSF9-201ENST00000377507 IGHV3-43A0A0B4J1X8 118 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 MBD3L4A6NDZ8 208 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 MBD3L3A6NE82 208 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 MBD3L5A6NJ08 208 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 RBFOX2O43251 390 aaKnown RBP eCLIP9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 SOX15O60248 233 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 HPRT1P00492 218 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 IGHV3-43DP0DP04 118 aa9.76□□□□□ -0.85
TNFRSF9-201ENST00000377507 S100PP25815 95 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms