RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 FAM90A18PA6NE21 464 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM90A16PA6NEW6 464 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM90A20PA6NIJ5 464 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM90A8PA6NJQ4 464 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM90A7PA6NKC0 464 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM90A22PA8MWA6 464 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM90A12PA8MX19 464 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM90A5PA8MXJ8 464 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM90A23PA8MXZ1 464 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 SNRNP70P08621 437 aaKnown RBP7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM90A15PP0C7V4 464 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM90A13PP0C7W8 464 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM90A14PP0C7W9 464 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM90A24PP0C7X0 464 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 VSIG10L2P0DP72 767 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 UBE2G2P60604 165 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 SLC35B1P78383 322 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 MYPOPQ86VE0 399 aaPredicted RBP7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 MED12LQ86YW9 2145 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 KCNRGQ8N5I3 272 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 MITD1Q8WV92 249 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 UHRF2Q96PU4 802 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 FBXL15Q9H469 300 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 CLEC5AQ9NY25 188 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 RABAC1Q9UI14 185 aa7.11□□□□□ -1.27
CRNKL1-202ENST00000377340 TRIM77I1YAP6 450 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 IGKV1D-33P01593 117 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 IGKV1-33P01594 117 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 H2AFB1P0C5Y9 115 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 HTN1P15515 57 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 GZMKP49863 264 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 LOXL3P58215 753 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 SLC38A11Q08AI6 406 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 SLC35E4Q6ICL7 350 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 PCSK4Q6UW60 755 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 Q6ZNX1 250 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 ZNF788Q6ZQV5 615 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 Q96MF0 132 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 LINC00527Q9UJ94 153 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 HSF4Q9ULV5 492 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 S4R3C0 116 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 IGKV1-12A0A0C4DH73 117 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 TXNL1O43396 289 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 IGKV1D-12P01611 117 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 COX5AP20674 150 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 TMEM50BP56557 158 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 GAMTQ14353 236 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 ETFRF1Q6IPR1 90 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 RNF144BQ7Z419 303 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 TMEM208Q9BTX3 173 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 PLEKHA2Q9HB19 425 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 PRNDQ9UKY0 176 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 KBTBD11-OT1A0A1B0GTJ5 212 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 F6UZH7 168 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 RPL8P62917 257 aaKnown RBP7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 HIST3H3Q16695 136 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 FAM74A1Q5RGS3 127 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 TMUB2Q71RG4 321 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 OR8I2Q8N0Y5 310 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 DYNLRB2Q8TF09 96 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 TMEM147Q9BVK8 224 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 SLC25A32Q9H2D1 315 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 OR51B2Q9Y5P1 312 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 PUS1Q9Y606 427 aaKnown RBP eCLIP7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 C2CD3Q4AC94 2353 aa7.1□□□□□ -1.27
CRNKL1-202ENST00000377340 B4DSR2 109 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 TMEM178BH3BS89 294 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 PLA2G10O15496 165 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 MLNRO43193 412 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 CD200P41217 278 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 BPIFB3P59826 476 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 OR2C3Q8N628 320 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 BLNKQ8WV28 456 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 GNG13Q9P2W3 67 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 CACFD1Q9UGQ2 172 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 JPT1Q9UK76 154 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 IGHV3OR16-13A0A075B7E8 117 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 IGHV3-74A0A0B4J1X5 117 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 SRRM5B3KS81 715 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 ETV2O00321 342 aaPredicted RBP7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 JTBO76095 146 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 HPRT1P00492 218 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 PPOXP50336 477 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 KLRD1Q13241 179 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 WDR25Q64LD2 544 aaPredicted RBP7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 SLC51BQ86UW2 128 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 DRAM1Q8N682 238 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 ZBTB34Q8NCN2 500 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 BORCS7Q96B45 105 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 TMEM186Q96B77 213 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 RAB40CQ96S21 281 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 UNKLQ9H9P5 680 aaKnown RBP7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 PNRC2Q9NPJ4 139 aaKnown RBP7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 PSPNO60542 156 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 SLC25A4P12235 298 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 EGR1P18146 543 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 NPY1RP25929 384 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 SLC6A1P30531 599 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 TAS2R45P59539 299 aa7.09□□□□□ -1.27
CRNKL1-202ENST00000377340 FHL1Q13642 323 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms