RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 FOSL1P15407 271 aa15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 NHLH2Q02577 135 aa15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 DGAT2L7PQ6IED9 249 aa15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 RBPMS2Q6ZRY4 209 aaKnown RBP15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 NEU4Q8WWR8 484 aaPredicted RBP15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 CHD5Q8TDI0 1954 aa15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 IGHV3-21A0A0B4J1V1 117 aa15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 NMBP08949 121 aa15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 MRPL13Q9BYD1 178 aaKnown RBP15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 B4DEV8 164 aa15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 HSPE1P61604 102 aaKnown RBP15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 RPL30P62888 115 aaKnown RBP15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 OR4A5Q8NH83 315 aa15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 REPIN1Q9BWE0 567 aaKnown RBP15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 ADAM11O75078 769 aa15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 SS18L1O75177 396 aaPredicted RBP15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 CD74P04233 296 aa15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 DCAF12L2Q5VW00 463 aa15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 FAM131CQ96AQ9 280 aa15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 SIRT7Q9NRC8 400 aa15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 DEPPQ9NTK1 212 aa15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 TMEM140Q9NV12 185 aa15.26■□□□□ 0.03
CLSTN1-202ENST00000377298 HELTA6NFD8 242 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 P01737 135 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 COL8A1P27658 744 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 KRTDAPP60985 99 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 OR4C13Q8NGP0 309 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 SMAD7O15105 426 aaKnown RBP15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 NEURL1O76050 574 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 ZNF273Q14593 569 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 GPR146Q96CH1 333 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 SDHCQ99643 169 aaPredicted RBP15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 SCN2AQ99250 2005 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 SLC25A17O43808 307 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 OR2A4O95047 310 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 BSPH1Q075Z2 132 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 ACP7Q6ZNF0 438 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 SPACA3Q8IXA5 215 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 PRSS3P2Q8NHM4 247 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 OR2A7Q96R45 310 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 NPIPB7O75200 414 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 OR10J1P30954 320 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 SUMO1P63165 101 aaKnown RBP15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 AWAT1Q58HT5 328 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 SELENOHQ8IZQ5 122 aaKnown RBP15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 C5orf17Q8NAS9 161 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 RBKSQ9H477 322 aa15.25■□□□□ 0.03
CLSTN1-202ENST00000377298 NYNRINQ9P2P1 1898 aaKnown RBP15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 AP4M1O00189 453 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 ASPHD2Q6ICH7 369 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 UNQ5815/PRO19632Q6UWF5 114 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 DNM1P46Q6ZS02 220 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 H1FOOQ8IZA3 346 aaPredicted RBP15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 CEP250Q9BV73 2442 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 KIAA1324LA8MWY0 1029 aaPredicted RBP15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 PGA5P0DJD9 388 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 OR2T10Q8NGZ9 312 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 PAXXQ9BUH6 204 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 SLC2A8Q9NY64 477 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 ZNF646O15015 1829 aaPredicted RBP15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 MARCH11A6NNE9 402 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 HAX1O00165 279 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 C11orf42Q8N5U0 333 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 PXMP4Q9Y6I8 212 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 J3KRW8 73 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 HIST1H3AP68431 136 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 KLHDC1Q8N7A1 406 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 POC1AQ8NBT0 407 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 TM2D1Q9BX74 207 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 OR5AC2Q9NZP5 309 aa15.24■□□□□ 0.03
CLSTN1-202ENST00000377298 OR2T8A6NH00 312 aa15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 PMCHP20382 165 aa15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 CAMPP49913 170 aa15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 RNASE6Q93091 150 aaKnown RBP15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 LSM10Q969L4 123 aaKnown RBP15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 ZNF837Q96EG3 531 aaPredicted RBP15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 C5orf66Q9H5L9 145 aa15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 AMTP48728 403 aa15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 UNC119Q13432 240 aa15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 ZNRF1Q8ND25 227 aa15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 SRSF10O75494 262 aaKnown RBP15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 PSG7Q13046 419 aa15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 GUCA2BQ16661 112 aa15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 HCP5Q6MZN7 132 aa15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 RNASEKQ6P5S7 137 aaKnown RBP15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 MRPL30Q8TCC3 161 aaKnown RBP15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 NRIP2Q9BQI9 281 aa15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 ERVS71-1P61550 626 aa15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 CXorf66Q5JRM2 361 aaPredicted RBP15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 RGP1Q92546 391 aaPredicted RBP15.23■□□□□ 0.03
CLSTN1-202ENST00000377298 WNT9BO14905 357 aa15.22■□□□□ 0.03
CLSTN1-202ENST00000377298 CFDP00746 253 aaPredicted RBP15.22■□□□□ 0.03
CLSTN1-202ENST00000377298 ORM1P02763 201 aa15.22■□□□□ 0.03
CLSTN1-202ENST00000377298 WNT5AP41221 380 aa15.22■□□□□ 0.03
CLSTN1-202ENST00000377298 PNKDQ8N490 385 aa15.22■□□□□ 0.03
CLSTN1-202ENST00000377298 ISOC2Q96AB3 205 aa15.22■□□□□ 0.03
CLSTN1-202ENST00000377298 TMEM204Q9BSN7 226 aa15.22■□□□□ 0.03
CLSTN1-202ENST00000377298 OR11H4Q8NGC9 324 aa15.22■□□□□ 0.03
CLSTN1-202ENST00000377298 A0A1W2PS18 150 aa15.22■□□□□ 0.03
CLSTN1-202ENST00000377298 SMDT1Q9H4I9 107 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms