RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 IGHEP01854 428 aa17.75■□□□□ 0.43
UPF3A-202ENST00000375299 SERPINA7P05543 415 aa17.75■□□□□ 0.43
UPF3A-202ENST00000375299 OR10J1P30954 320 aa17.75■□□□□ 0.43
UPF3A-202ENST00000375299 RPL30P62888 115 aaKnown RBP17.75■□□□□ 0.43
UPF3A-202ENST00000375299 TMEM256Q8N2U0 113 aa17.75■□□□□ 0.43
UPF3A-202ENST00000375299 ZDHHC16Q969W1 377 aa17.75■□□□□ 0.43
UPF3A-202ENST00000375299 TMEM68Q96MH6 324 aa17.75■□□□□ 0.43
UPF3A-202ENST00000375299 PATE3B3GLJ2 98 aa17.75■□□□□ 0.43
UPF3A-202ENST00000375299 S1PR2O95136 353 aa17.75■□□□□ 0.43
UPF3A-202ENST00000375299 CRYAAP02489 173 aa17.75■□□□□ 0.43
UPF3A-202ENST00000375299 EGR1P18146 543 aa17.75■□□□□ 0.43
UPF3A-202ENST00000375299 CYB561P49447 251 aa17.75■□□□□ 0.43
UPF3A-202ENST00000375299 CASP6P55212 293 aa17.75■□□□□ 0.43
UPF3A-202ENST00000375299 FOXL1Q12952 345 aa17.75■□□□□ 0.43
UPF3A-202ENST00000375299 CIB3Q96Q77 187 aaPredicted RBP17.75■□□□□ 0.43
UPF3A-202ENST00000375299 DIRC2Q96SL1 478 aa17.75■□□□□ 0.43
UPF3A-202ENST00000375299 OR2D2Q9H210 308 aa17.75■□□□□ 0.43
UPF3A-202ENST00000375299 MED12LQ86YW9 2145 aa17.74■□□□□ 0.43
UPF3A-202ENST00000375299 DIDO1Q9BTC0 2240 aaKnown RBP17.74■□□□□ 0.43
UPF3A-202ENST00000375299 BTF3P20290 206 aaKnown RBP17.74■□□□□ 0.43
UPF3A-202ENST00000375299 RAB4AP20338 218 aa17.74■□□□□ 0.43
UPF3A-202ENST00000375299 LHX2P50458 406 aa17.74■□□□□ 0.43
UPF3A-202ENST00000375299 TDGF1P3P51864 188 aa17.74■□□□□ 0.43
UPF3A-202ENST00000375299 Q8IYB0 196 aa17.74■□□□□ 0.43
UPF3A-202ENST00000375299 C5orf30Q96GV9 206 aa17.74■□□□□ 0.43
UPF3A-202ENST00000375299 AURKAIP1Q9NWT8 199 aaPredicted RBP17.74■□□□□ 0.43
UPF3A-202ENST00000375299 BOKQ9UMX3 212 aaPredicted RBP17.74■□□□□ 0.43
UPF3A-202ENST00000375299 A0A1B0GUS0 222 aa17.74■□□□□ 0.43
UPF3A-202ENST00000375299 G0S2P27469 103 aa17.74■□□□□ 0.43
UPF3A-202ENST00000375299 ATP5G3P48201 142 aa17.74■□□□□ 0.43
UPF3A-202ENST00000375299 WDR86Q86TI4 376 aa17.74■□□□□ 0.43
UPF3A-202ENST00000375299 APH1AQ96BI3 265 aa17.74■□□□□ 0.43
UPF3A-202ENST00000375299 MS4A10Q96PG2 267 aa17.74■□□□□ 0.43
UPF3A-202ENST00000375299 RTL8AQ9BWD3 113 aa17.74■□□□□ 0.43
UPF3A-202ENST00000375299 C1QTNF9P0C862 333 aa17.73■□□□□ 0.43
UPF3A-202ENST00000375299 GCH1P30793 250 aa17.73■□□□□ 0.43
UPF3A-202ENST00000375299 ERVK11-1P61568 191 aa17.73■□□□□ 0.43
UPF3A-202ENST00000375299 CATR1Q13166 79 aa17.73■□□□□ 0.43
UPF3A-202ENST00000375299 EIF4EBP1Q13541 118 aaPredicted RBP17.73■□□□□ 0.43
UPF3A-202ENST00000375299 KCNIP2Q9NS61 270 aa17.73■□□□□ 0.43
UPF3A-202ENST00000375299 NUPR1O60356 82 aa17.73■□□□□ 0.43
UPF3A-202ENST00000375299 RAC2P15153 192 aa17.73■□□□□ 0.43
UPF3A-202ENST00000375299 CLDN18P56856 261 aa17.73■□□□□ 0.43
UPF3A-202ENST00000375299 UBE2G2P60604 165 aa17.73■□□□□ 0.43
UPF3A-202ENST00000375299 ZNF808Q8N4W9 903 aaPredicted RBP17.73■□□□□ 0.43
UPF3A-202ENST00000375299 ELOVL5Q9NYP7 299 aa17.73■□□□□ 0.43
UPF3A-202ENST00000375299 RAB29O14966 203 aa17.72■□□□□ 0.43
UPF3A-202ENST00000375299 NDUFB4O95168 129 aa17.72■□□□□ 0.43
UPF3A-202ENST00000375299 SCCPDHQ8NBX0 429 aa17.72■□□□□ 0.43
UPF3A-202ENST00000375299 DERL1Q9BUN8 251 aa17.72■□□□□ 0.43
UPF3A-202ENST00000375299 PRO3102Q9H379 93 aa17.72■□□□□ 0.43
UPF3A-202ENST00000375299 POLDIP2Q9Y2S7 368 aa17.72■□□□□ 0.43
UPF3A-202ENST00000375299 F6UZH7 168 aa17.72■□□□□ 0.43
UPF3A-202ENST00000375299 DUSP3P51452 185 aaPredicted RBP17.72■□□□□ 0.43
UPF3A-202ENST00000375299 SPATA46Q5T0L3 261 aa17.72■□□□□ 0.43
UPF3A-202ENST00000375299 CST9LP1Q5W188 147 aa17.72■□□□□ 0.43
UPF3A-202ENST00000375299 Q8N7P7 452 aa17.72■□□□□ 0.43
UPF3A-202ENST00000375299 IER2Q9BTL4 223 aa17.72■□□□□ 0.43
UPF3A-202ENST00000375299 KCNIP1Q9NZI2 227 aa17.72■□□□□ 0.43
UPF3A-202ENST00000375299 DOCK11Q5JSL3 2073 aa17.71■□□□□ 0.43
UPF3A-202ENST00000375299 KMT2EQ8IZD2 1858 aa17.71■□□□□ 0.43
UPF3A-202ENST00000375299 A0A1B0GWJ7 208 aa17.71■□□□□ 0.43
UPF3A-202ENST00000375299 C17orf98A8MV24 154 aa17.71■□□□□ 0.43
UPF3A-202ENST00000375299 ZNF705FA8MVS1 300 aaPredicted RBP17.71■□□□□ 0.43
UPF3A-202ENST00000375299 MT-CO3P00414 261 aa17.71■□□□□ 0.43
UPF3A-202ENST00000375299 ZNF705DP0CH99 300 aaPredicted RBP17.71■□□□□ 0.43
UPF3A-202ENST00000375299 ZNF705BP0CI00 300 aaPredicted RBP17.71■□□□□ 0.43
UPF3A-202ENST00000375299 BMP5P22003 454 aa17.71■□□□□ 0.43
UPF3A-202ENST00000375299 SOX8P57073 446 aa17.71■□□□□ 0.43
UPF3A-202ENST00000375299 ZNF146Q15072 292 aa17.71■□□□□ 0.43
UPF3A-202ENST00000375299 TMEM249Q2WGJ8 235 aa17.71■□□□□ 0.43
UPF3A-202ENST00000375299 ZNF114Q8NC26 417 aa17.71■□□□□ 0.43
UPF3A-202ENST00000375299 SGMS2Q8NHU3 365 aa17.71■□□□□ 0.43
UPF3A-202ENST00000375299 RAB1CQ92928 201 aa17.71■□□□□ 0.43
UPF3A-202ENST00000375299 SFRP2Q96HF1 295 aa17.71■□□□□ 0.43
UPF3A-202ENST00000375299 THOC3Q96J01 351 aaKnown RBP17.71■□□□□ 0.43
UPF3A-202ENST00000375299 SH2D1BO14796 132 aa17.71■□□□□ 0.42
UPF3A-202ENST00000375299 CLDN14O95500 239 aa17.71■□□□□ 0.42
UPF3A-202ENST00000375299 CELA3AP09093 270 aa17.71■□□□□ 0.42
UPF3A-202ENST00000375299 CD82P27701 267 aa17.71■□□□□ 0.42
UPF3A-202ENST00000375299 ADMP35318 185 aa17.71■□□□□ 0.42
UPF3A-202ENST00000375299 BRWD1-AS2P59051 145 aa17.71■□□□□ 0.42
UPF3A-202ENST00000375299 ZCCHC14Q8WYQ9 949 aaKnown RBP17.71■□□□□ 0.42
UPF3A-202ENST00000375299 R3HDM4Q96D70 268 aa17.71■□□□□ 0.42
UPF3A-202ENST00000375299 TBX15Q96SF7 602 aa17.71■□□□□ 0.42
UPF3A-202ENST00000375299 MDFIC2A0A1B0GVS7 189 aa17.7■□□□□ 0.42
UPF3A-202ENST00000375299 NXPH2O95156 264 aa17.7■□□□□ 0.42
UPF3A-202ENST00000375299 TDGF1P13385 188 aa17.7■□□□□ 0.42
UPF3A-202ENST00000375299 OR3A1P47881 315 aa17.7■□□□□ 0.42
UPF3A-202ENST00000375299 UBE2NP61088 152 aaKnown RBP17.7■□□□□ 0.42
UPF3A-202ENST00000375299 SPINK9Q5DT21 86 aa17.7■□□□□ 0.42
UPF3A-202ENST00000375299 SPINK14Q6IE38 97 aa17.7■□□□□ 0.42
UPF3A-202ENST00000375299 CMTM2Q8TAZ6 248 aa17.7■□□□□ 0.42
UPF3A-202ENST00000375299 ZNF703Q9H7S9 590 aaPredicted RBP17.7■□□□□ 0.42
UPF3A-202ENST00000375299 WDR83OSQ9Y284 106 aa17.7■□□□□ 0.42
UPF3A-202ENST00000375299 R4GN57 208 aa17.7■□□□□ 0.42
UPF3A-202ENST00000375299 FREM2Q5SZK8 3169 aa17.7■□□□□ 0.42
UPF3A-202ENST00000375299 TRAV38-1A0A0B4J264 116 aa17.69■□□□□ 0.42
UPF3A-202ENST00000375299 PGPEP1LA6NFU8 196 aa17.69■□□□□ 0.42
UPF3A-202ENST00000375299 YPEL3P61236 119 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms