RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 M0R3E3 92 aa8.8□□□□□ -1
PTCH1-204ENST00000375290 LINC00114Q6XXX2 140 aa8.8□□□□□ -1
PTCH1-204ENST00000375290 C5orf67F2Z3F1 127 aa8.8□□□□□ -1
PTCH1-204ENST00000375290 J3QRE1 110 aa8.8□□□□□ -1
PTCH1-204ENST00000375290 OR8I2Q8N0Y5 310 aa8.8□□□□□ -1
PTCH1-204ENST00000375290 AMER3Q8N944 861 aa8.8□□□□□ -1
PTCH1-204ENST00000375290 RAB1CQ92928 201 aa8.8□□□□□ -1
PTCH1-204ENST00000375290 GPR146Q96CH1 333 aa8.8□□□□□ -1
PTCH1-204ENST00000375290 IGHV3-9P01782 118 aa8.8□□□□□ -1
PTCH1-204ENST00000375290 HINT1P49773 126 aaPredicted RBP8.8□□□□□ -1
PTCH1-204ENST00000375290 HOXA4Q00056 320 aaPredicted RBP8.8□□□□□ -1
PTCH1-204ENST00000375290 FUT5Q11128 374 aa8.8□□□□□ -1
PTCH1-204ENST00000375290 CIARTQ8N365 385 aaPredicted RBP8.8□□□□□ -1
PTCH1-204ENST00000375290 RLN3Q8WXF3 142 aa8.8□□□□□ -1
PTCH1-204ENST00000375290 ANK1P16157 1881 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 CEACAM18A8MTB9 384 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 NPIPB6E9PJ23 425 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 K7EQS6 105 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 TSPAN2O60636 221 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 HIST1H2BKO60814 126 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 F12P00748 615 aaPredicted RBP8.79□□□□□ -1
PTCH1-204ENST00000375290 HIST1H2BJP06899 126 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 HIST1H2BOP23527 126 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 HIST1H2BBP33778 126 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 HIST1H2BDP58876 126 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 HIST1H2BCP62807 126 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 HIST2H2BEQ16778 126 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.79□□□□□ -1
PTCH1-204ENST00000375290 FHL5Q5TD97 284 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 OR10AC1Q8NH08 325 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 HIST1H2BHQ93079 126 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 HIST1H2BNQ99877 126 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 HIST1H2BMQ99879 126 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 PILRAQ9UKJ1 303 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 RP1P56715 2156 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 TRAV39A0A0B4J263 110 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 TMEM189A5PLL7 270 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 G3V3Y1 287 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 NMUP48645 174 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 PIN1P1O15428 100 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 LMX1BO60663 402 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 RELQ04864 619 aaPredicted RBP8.79□□□□□ -1
PTCH1-204ENST00000375290 ZNF324BQ6AW86 544 aaPredicted RBP8.79□□□□□ -1
PTCH1-204ENST00000375290 OR51G1Q8NGK1 321 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 ALKBH7Q9BT30 221 aaPredicted RBP8.79□□□□□ -1
PTCH1-204ENST00000375290 WNT16Q9UBV4 365 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 LOC285556D6RIA3 1793 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 SRIP30626 198 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 HIST1H1AQ02539 215 aaPredicted RBP8.79□□□□□ -1
PTCH1-204ENST00000375290 TEX29Q8N6K0 151 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 RNASEH2CQ8TDP1 164 aaKnown RBP8.79□□□□□ -1
PTCH1-204ENST00000375290 RALGAPA1Q6GYQ0 2036 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 HIST1H4GQ99525 98 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 MEF2CQ06413 473 aaPredicted RBP8.79□□□□□ -1
PTCH1-204ENST00000375290 OPN3Q9H1Y3 402 aaPredicted RBP8.79□□□□□ -1
PTCH1-204ENST00000375290 JKAMPQ9P055 326 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 IGHV5-51A0A0C4DH38 117 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 BTCP35070 178 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 NXPH1P58417 271 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 APOBEC4Q8WW27 367 aaKnown RBP8.79□□□□□ -1
PTCH1-204ENST00000375290 SCN10AQ9Y5Y9 1956 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 MOB3BQ86TA1 216 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 RCC1LQ96I51 464 aaKnown RBP8.79□□□□□ -1
PTCH1-204ENST00000375290 ZNF714Q96N38 554 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 OR2J1Q9GZK6 312 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 ASCC3Q8N3C0 2202 aaKnown RBP8.79□□□□□ -1
PTCH1-204ENST00000375290 TM4SF5O14894 197 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 SLC35E4Q6ICL7 350 aa8.79□□□□□ -1
PTCH1-204ENST00000375290 C9orf40Q8IXQ3 194 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 C7orf71A4D174 169 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 OR11H12B2RN74 326 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 SMIM10L1P0DMW3 83 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 LYZP61626 148 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 OR11H1Q8NG94 326 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 OR11H2Q8NH07 326 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 SMIM10Q96HG1 83 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 GPR82Q96P67 336 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 HCSTQ9UBK5 93 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 TCFL5Q9UL49 500 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 TMEM229AB2RXF0 380 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 IGFBP3P17936 291 aaPredicted RBP8.78□□□□□ -1
PTCH1-204ENST00000375290 PIGYQ3MUY2 71 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 FAM166AQ6J272 317 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 OR4C13Q8NGP0 309 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 NPCDR1Q9BY65 106 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 MKRN2OSH3BPM6 223 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 NUTF2P61970 127 aaKnown RBP8.78□□□□□ -1
PTCH1-204ENST00000375290 PATE1Q8WXA2 126 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 C8orf44Q96CB5 159 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 TMEM78Q5T7P6 136 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 OR8A1Q8NGG7 326 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 ORAOV1Q8WV07 137 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 OSR1Q8TAX0 266 aaPredicted RBP8.78□□□□□ -1
PTCH1-204ENST00000375290 DMRTA1Q5VZB9 504 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 SSMEM1Q8WWF3 244 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 RHOVQ96L33 236 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 ICE1Q9Y2F5 2266 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 NRXN2Q9P2S2 1712 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 ARL14EPLP0DKL9 152 aa8.78□□□□□ -1
PTCH1-204ENST00000375290 OR1N2Q8NGR9 330 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms